RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 CYB5R1Q9UHQ9 305 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 GDF2Q9UK05 429 aaPredicted RBP13.8□□□□□ -0.2
RAB40C-208ENST00000564703 GRIP1Q9Y3R0 1128 aa13.8□□□□□ -0.2
RAB40C-208ENST00000564703 POLQO75417 2590 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 SYNGR3O43761 229 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 ABHD16AO95870 558 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 GGT2P36268 569 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 SNRPD2P62316 118 aaKnown RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 HIST1H3AP68431 136 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 NKX6-1P78426 367 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 APOFQ13790 326 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 TAF13Q15543 124 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 ADIPOQQ15848 244 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 TEX30Q5JUR7 227 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 HIST2H3PS2Q5TEC6 136 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 SLC18B1Q6NT16 456 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 HIST2H3AQ71DI3 136 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 ZNF771Q7L3S4 317 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 ERI1Q8IV48 349 aaKnown RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 PAQR4Q8N4S7 273 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 OR1J1Q8NGS3 322 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 OR6N2Q8NGY6 317 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 TMEM163Q8TC26 289 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 IPCEF1Q8WWN9 437 aaPredicted RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 IL4I1Q96RQ9 567 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 DCLRE1CQ96SD1 692 aaKnown RBP13.79□□□□□ -0.2
RAB40C-208ENST00000564703 TEAD3Q99594 435 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 SLC29A1Q99808 456 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 FOXC2Q99958 501 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 PLK3Q9H4B4 646 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 C8orf4Q9NR00 106 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 IMPAD1Q9NX62 359 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 ATPIF1Q9UII2 106 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 DUSP13Q9UII6 198 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 GPR160Q9UJ42 338 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 COMMD3-BMI1R4GMX3 469 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 FBN2P35556 2912 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 CREBBPQ92793 2442 aa13.79□□□□□ -0.2
RAB40C-208ENST00000564703 TACC2O95359 2948 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 PRKYO43930 277 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 CD8AP01732 235 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 GCH1P30793 250 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 RGS6P49758 472 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 MOGQ16653 247 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 LRRC36Q1X8D7 754 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 ZNF718Q3SXZ3 478 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 LINC01590Q5TEZ4 76 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 LCN1P1Q5VSP4 162 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 DCXRQ7Z4W1 244 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 GALNT4Q8N4A0 578 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 TRUB1Q8WWH5 349 aaKnown RBP13.78□□□□□ -0.2
RAB40C-208ENST00000564703 ZMYND19Q96E35 227 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-208ENST00000564703 COG8Q96MW5 612 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 COQ7Q99807 217 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 ATF6BQ99941 703 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 TOR3AQ9H497 397 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 CENPMQ9NSP4 180 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 RAI1Q7Z5J4 1906 aaPredicted RBP13.78□□□□□ -0.2
RAB40C-208ENST00000564703 NAV2Q8IVL1 2488 aa13.78□□□□□ -0.2
RAB40C-208ENST00000564703 F5H5K5 113 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 OVOL3O00110 214 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 GPRIN2O60269 458 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 TUBG1P23258 451 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 RPS27P42677 84 aaKnown RBP13.77□□□□□ -0.21
RAB40C-208ENST00000564703 SLC15A1P46059 708 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 EVX1P49640 407 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 LRBAP50851 2863 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 NUDT6P53370 316 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 ATP5J2P56134 94 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 TPTEP56180 551 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 EIF2B1Q14232 305 aaKnown RBP13.77□□□□□ -0.21
RAB40C-208ENST00000564703 EFNB3Q15768 340 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 NXNL2Q5VZ03 156 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 LYPD4Q6UWN0 246 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 CFAP77Q6ZQR2 320 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 MEPCEQ7L2J0 689 aaKnown RBP13.77□□□□□ -0.21
RAB40C-208ENST00000564703 HRNRQ86YZ3 2850 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-208ENST00000564703 GID4Q8IVV7 300 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 LRRC75A-AS1Q8N1F1 130 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 ZNF555Q8NEP9 628 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 BBS1Q8NFJ9 593 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 OR5L1Q8NGL2 311 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 ABHD4Q8TB40 342 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 SYNPRQ8TBG9 265 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 SPTSSAQ969W0 71 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 MRPL24Q96A35 216 aaKnown RBP13.77□□□□□ -0.21
RAB40C-208ENST00000564703 PERPQ96FX8 193 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 HRASLS5Q96KN8 279 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 VRK1Q99986 396 aaPredicted RBP13.77□□□□□ -0.21
RAB40C-208ENST00000564703 CACNG6Q9BXT2 260 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 TUBG2Q9NRH3 451 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 TBCCD1Q9NVR7 557 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 GMPPBQ9Y5P6 360 aa13.77□□□□□ -0.21
RAB40C-208ENST00000564703 ARID1AO14497 2285 aa13.76□□□□□ -0.21
RAB40C-208ENST00000564703 SLC22A31A6NKX4 558 aa13.76□□□□□ -0.21
RAB40C-208ENST00000564703 ERCC1P07992 297 aaPredicted RBP13.76□□□□□ -0.21
RAB40C-208ENST00000564703 CDKN1AP38936 164 aa13.76□□□□□ -0.21
RAB40C-208ENST00000564703 PTH2RP49190 550 aa13.76□□□□□ -0.21
RAB40C-208ENST00000564703 PPP1CBP62140 327 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms