RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 IL22Q9GZX6 179 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 UGT1A7Q9HAW7 530 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 UGT1A8Q9HAW9 530 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 LZTFL1Q9NQ48 299 aa2.28□□□□□ -2.04
UBR1-205ENST00000564540 LYARQ9NX58 379 aaKnown RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 COL5A1P20908 1838 aaPredicted RBP2.28□□□□□ -2.04
UBR1-205ENST00000564540 IGKV1D-13A0A0B4J2D9 117 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 A0A0J9YYE9 177 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 LOC100506127A0A0U1RQW1 187 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 A0A1B0GUH1 482 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 A0A1W2PPV4 95 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ZNF879B4DU55 563 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 H0YHG0 523 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 BCKDKO14874 412 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 OR7A10O76100 309 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 TRBC1P01850 177 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 MBP02144 154 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 SERPINE2P07093 398 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ANXA5P08758 320 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 CCDC172P0C7W6 258 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 SMIM10L1P0DMW3 83 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 IGKV1-13P0DP09 117 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ZNF24P17028 368 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 TCN2P20062 427 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 PTNP21246 168 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 NSG1P42857 185 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 RAB10P61026 200 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 RAP1AP62834 184 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 SCRN3Q0VDG4 424 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 AQP6Q13520 282 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 OR5I1Q13606 314 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 DGUOKQ16854 277 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ZNF829Q3KNS6 432 aaPredicted RBP2.27□□□□□ -2.05
UBR1-205ENST00000564540 Q3ZCU0 254 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ZNF684Q5T5D7 378 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 MLIPQ5VWP3 458 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 RIMKLAQ8IXN7 391 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 PROKR2Q8NFJ6 384 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 OR9G4Q8NGQ1 327 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 LKAAEAR1Q8TD35 194 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 GEMIN6Q8WXD5 167 aaKnown RBP2.27□□□□□ -2.05
UBR1-205ENST00000564540 CERS2Q96G23 380 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 SMIM10Q96HG1 83 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ATP6V1G3Q96LB4 118 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 OR51M1Q9H341 326 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 CCNB1IP1Q9NPC3 277 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 PXMP2Q9NR77 195 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 ZNHIT6Q9NWK9 470 aaKnown RBP2.27□□□□□ -2.05
UBR1-205ENST00000564540 KCNIP3Q9Y2W7 256 aa2.27□□□□□ -2.05
UBR1-205ENST00000564540 FBN1P35555 2871 aaKnown RBP2.27□□□□□ -2.05
UBR1-205ENST00000564540 YEATS2Q9ULM3 1422 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SHANK1Q9Y566 2161 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 CEMIPQ8WUJ3 1361 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 DOCK8Q8NF50 2099 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 KBTBD11-OT1A0A1B0GTJ5 212 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 RAB29O14966 203 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SIVA1O15304 175 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 RBFOX2O43251 390 aaKnown RBP eCLIP2.26□□□□□ -2.05
UBR1-205ENST00000564540 KDELR3O43731 214 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 CLPXO76031 633 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 LINC00869P0C866 280 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 UBTFL1P0CB47 393 aaPredicted RBP2.26□□□□□ -2.05
UBR1-205ENST00000564540 RRM2P31350 389 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 VHLP40337 213 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 YWHAGP61981 247 aaKnown RBP eCLIP2.26□□□□□ -2.05
UBR1-205ENST00000564540 ERVK-25P63136 954 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 HSDL1Q3SXM5 330 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SOHLH1Q5JUK2 328 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 C9orf135Q5VTT2 229 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 C22orf42Q6IC83 251 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SLC25A25Q6KCM7 469 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 LRRC74BQ6ZQY2 392 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 H2AFVQ71UI9 128 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SLC16A14Q7RTX9 510 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 PLA2G4DQ86XP0 818 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 NUDCD3Q8IVD9 361 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 STPG2Q8N412 459 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 MS4A15Q8N5U1 240 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 OR4A15Q8NGL6 344 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 OR10G4Q8NGN3 311 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 OR4A4PQ8NGN8 299 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 GPR151Q8TDV0 419 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 PIBF1Q8WXW3 757 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 C8orf44Q96CB5 159 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 TSSK3Q96PN8 268 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SLC29A1Q99808 456 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 SYNDIG1Q9H7V2 258 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 GPATCH2LQ9NWQ4 482 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 CLN8Q9UBY8 286 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 NUP50Q9UKX7 468 aa2.26□□□□□ -2.05
UBR1-205ENST00000564540 KCNE1BA0A087WTH5 132 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 KIR2DS1A0A191URI9 304 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 CCDC182A6NF36 153 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 SMCO2A6NFE2 343 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 OR5B21A6NL26 309 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 ZNF99A8MXY4 864 aaPredicted RBP2.25□□□□□ -2.05
UBR1-205ENST00000564540 K7ERQ8 282 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 PSMD11O00231 422 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 GOSR2O14653 212 aa2.25□□□□□ -2.05
UBR1-205ENST00000564540 YKT6O15498 198 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms