RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 NCOA6Q14686 2063 aaPredicted RBP16.94■□□□□ 0.3
SMPD3-203ENST00000563226 TTRP02766 147 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 SDHBP21912 280 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 ANOS1P23352 680 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 CYB561P49447 251 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 KLF9Q13886 244 aaPredicted RBP16.94■□□□□ 0.3
SMPD3-203ENST00000563226 BIVMQ86UB2 503 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 OR9K2Q8NGE7 335 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 OR52I2Q8NH67 350 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 OR14L1PQ8NHC6 308 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 SLC7A6Q92536 515 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 S100A16Q96FQ6 103 aaKnown RBP16.94■□□□□ 0.3
SMPD3-203ENST00000563226 OR2M2Q96R28 347 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 CDC6Q99741 560 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 GLTPQ9NZD2 209 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 CACNA1HO95180 2353 aa16.94■□□□□ 0.3
SMPD3-203ENST00000563226 EIF1BO60739 113 aaKnown RBP16.93■□□□□ 0.3
SMPD3-203ENST00000563226 CD2P06729 351 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 ACSM4P0C7M7 580 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 FSTP19883 344 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 GDNFP39905 211 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM69Q5SWH9 247 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 RAB40AQ8WXH6 277 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 MRPL15Q9P015 296 aaKnown RBP16.93■□□□□ 0.3
SMPD3-203ENST00000563226 ZNF221Q9UK13 617 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 INMT-MINDY4F8WBC2 141 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 RER1O15258 196 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 ORC5O43913 435 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 WDPCPO95876 746 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 CFPP27918 469 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 CSNK2A1P68400 391 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-203ENST00000563226 SPINK14Q6IE38 97 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 FAM166AQ6J272 317 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 ZNF704Q6ZNC4 412 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-203ENST00000563226 GGNQ86UU5 652 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 NAA11Q9BSU3 229 aaPredicted RBP16.93■□□□□ 0.3
SMPD3-203ENST00000563226 PBOV1Q9GZY1 135 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 PNRC2Q9NPJ4 139 aaKnown RBP16.93■□□□□ 0.3
SMPD3-203ENST00000563226 STMN3Q9NZ72 180 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 IL17BQ9UHF5 180 aa16.93■□□□□ 0.3
SMPD3-203ENST00000563226 C21orf140B9A014 251 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 NPIPA2E9PIF3 369 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 NPIPA3F8WFD2 350 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 SLC17A2O00624 439 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 SMAD9O15198 467 aaKnown RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 GALR2O43603 387 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TNFSF15O95150 251 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 MT-ND4P03905 459 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 UBCP0CG48 685 aaKnown RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 CSNK1A1P48729 337 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 POU3F4P49335 361 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 SELENOPP49908 381 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TAS2R20P59543 309 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 EIF3IQ13347 325 aaKnown RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 POU4F3Q15319 338 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 KCNJ8Q15842 424 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 RAB11BQ15907 218 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 WIPI1Q5MNZ9 446 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 KLHL24Q6TFL4 600 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 ZIC4Q8N9L1 334 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 OR2AJ1Q8NGZ0 328 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM54Q969K7 222 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 CREB3L1Q96BA8 519 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 ZNF775Q96BV0 537 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 BEX2Q9BXY8 128 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 GPR87Q9BY21 358 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 CGGBP1Q9UFW8 167 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 ZNF878C9JN71 531 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TLX3O43711 291 aaPredicted RBP16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TRAPPC2P0DI81 140 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TRAPPC2BP0DI82 140 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 STARP49675 285 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 GABREP78334 506 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 SPOCK1Q08629 439 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 KCNMB1Q16558 191 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM244Q5VVB8 128 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TMEM123Q8N131 208 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 SUMF1Q8NBK3 374 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 OR6N1Q8NGY5 312 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 ADAMTS17Q8TE56 1095 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 SLC25A28Q96A46 364 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 DMRTB1Q96MA1 342 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 LRFN1Q9P244 771 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 CKLFQ9UBR5 152 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 KLK11Q9UBX7 282 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 MED13Q9UHV7 2174 aa16.92■□□□□ 0.3
SMPD3-203ENST00000563226 TTLL8A6PVC2 850 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 TRAPPC6AO75865 159 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 VAMP5O95183 116 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 SLC2A1P11166 492 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 GIFP27352 417 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 HLA-DMAP28067 261 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 CD96P40200 585 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 CCR6P51684 374 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 PRKXP51817 358 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 C2orf76Q3KRA6 126 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 ELMOD2Q8IZ81 293 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 FAM3DQ96BQ1 224 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 SIGLEC12Q96PQ1 595 aa16.91■□□□□ 0.3
SMPD3-203ENST00000563226 ZNF416Q9BWM5 594 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms