RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 AMDHD1Q96NU7 426 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF281Q9Y2X9 895 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 ADAM18Q9Y3Q7 739 aa12.66□□□□□ -0.38
GTF3C1-203ENST00000562609 C13orf42A0A1B0GVH6 325 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 C2CD4DB7Z1M9 353 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ATXN8OSP0DMR3 200 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 PSMB6P28072 239 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 BTN3A2P78410 334 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 TGM3Q08188 693 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 NKPD1Q17RQ9 610 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 OR2A2Q6IF42 318 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 TTLL10Q6ZVT0 673 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 KCTD9Q7L273 389 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 C1QL4Q86Z23 238 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ADAMTS17Q8TE56 1095 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 MOAP1Q96BY2 351 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ATG101Q9BSB4 218 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF426Q9BUY5 554 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 SRMSQ9H3Y6 488 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 C6orf106Q9H6K1 298 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 SLCO1B1Q9Y6L6 691 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 FRYLO94915 3013 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 DCTN6O00399 190 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 LRP3O75074 770 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 CTAG2O75638 210 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ZFPL1O95159 310 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 AIFM1O95831 613 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 MAS1P04201 325 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 CSN2P05814 226 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 CELA2BP08218 269 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 MAOAP21397 527 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 PNLIPRP3Q17RR3 467 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ALG11Q2TAA5 492 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF574Q6ZN55 896 aaPredicted RBP12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 TMPRSS11FQ6ZWK6 438 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 NRROSQ86YC3 692 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 OR4N5Q8IXE1 308 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 OR51A7Q8NH64 312 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 SLC2A12Q8TD20 617 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ST7LQ8TDW4 575 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 COL26A1Q96A83 441 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 FAM131CQ96AQ9 280 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 WDR92Q96MX6 357 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 ZNF576Q9H609 170 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 TMEM74BQ9NUR3 256 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 HAO2Q9NYQ3 351 aa12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 FARSAQ9Y285 508 aaKnown RBP12.65□□□□□ -0.38
GTF3C1-203ENST00000562609 DMDP11532 3685 aa12.65□□□□□ -0.39
GTF3C1-203ENST00000562609 TRAV27A0A087WT01 109 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 C5orf51A6NDU8 294 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF726A6NNF4 738 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ALOX12BO75342 701 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 F3P13726 295 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 PVRP15151 417 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 GABRG2P18507 467 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 NANOS3P60323 173 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 NFATC4Q14934 902 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 HMGN3Q15651 99 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ANKRD16Q6P6B7 361 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 TMEM205Q6UW68 189 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 KDF1Q8NAX2 398 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 SMRP1Q8NCR6 262 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 CASTOR1Q8WTX7 329 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 GPR174Q9BXC1 333 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 UNKLQ9H9P5 680 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 CDV3Q9UKY7 258 aaKnown RBP12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 COLEC10Q9Y6Z7 277 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 CFAP54Q96N23 3096 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ZNF860A6NHJ4 632 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 RCBTB2O95199 551 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 WNT11O96014 354 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 OR2T7P0C7T2 308 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 CMPK1P30085 196 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 TAS2R19P59542 299 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ACY1Q03154 408 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 FOXO1Q12778 655 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ZIC1Q15915 447 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 Q6ZSR6 202 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 TAF8Q7Z7C8 310 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 ZSCAN4Q8NAM6 433 aaPredicted RBP12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 OR51D1Q8NGF3 324 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 OR2T27Q8NH04 317 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 GPR61Q9BZJ8 451 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 RAB33BQ9H082 229 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 KCNK15Q9H427 330 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 SPACA1Q9HBV2 294 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 DUSP22Q9NRW4 184 aa12.64□□□□□ -0.39
GTF3C1-203ENST00000562609 TBX19O60806 448 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 TMEM127O75204 238 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 CRHP06850 196 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 HNRNPA2B1P22626 353 aaKnown RBP12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 HSD17B7P56937 341 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 PPP1R1AQ13522 171 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 C1orf61Q13536 156 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 MEF2DQ14814 521 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 WDR88Q6ZMY6 472 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 TMPPEQ6ZT21 453 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 VN1R4Q7Z5H5 301 aa12.63□□□□□ -0.39
GTF3C1-203ENST00000562609 SLC35F2Q8IXU6 374 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms