RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
TCF4-213ENST00000562543 NKX6-3A6NJ46 265 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 ZSCAN5BA6NJL1 495 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 SEC14L6B5MCN3 397 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 SULT2B1O00204 365 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 SPRY3O43610 288 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 GMNNO75496 209 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 ERAL1O75616 437 aaKnown RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 WDR47O94967 919 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 PAHP00439 452 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 LIPFP07098 398 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 CD55P08174 381 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 MYL2P10916 166 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 UBL4AP11441 157 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 IVDP26440 423 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 NMBRP28336 390 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 PTPN7P35236 360 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 BSGP35613 385 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 RGS4P49798 205 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 ARFIP1P53367 373 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 TMBIM6P55061 237 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 ARL4CP56559 192 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 GLO1Q04760 184 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 GALNT1Q10472 559 aaPredicted RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 SELPLGQ14242 412 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 KCNJ8Q15842 424 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 CCNG2Q16589 344 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 DECR1Q16698 335 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 SPDYE7PQ495Y7 208 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 C6orf183Q5T699 404 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 METAP1DQ6UB28 335 aaPredicted RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 ZNF841Q6ZN19 808 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 SPARTQ8N0X7 666 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 OR4X2Q8NGF9 303 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 RFWD2Q8NHY2 731 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 CDKL2Q92772 493 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 RGMAQ96B86 450 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 TAMM41Q96BW9 452 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 ZNF524Q96C55 264 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 CMTM7Q96FZ5 175 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 AURKBQ96GD4 344 aaPredicted RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 TXNDC15Q96J42 360 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 FAM110AQ9BQ89 295 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 AIFM2Q9BRQ8 373 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 SHCBP1LQ9BZQ2 653 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 TINAGL1Q9GZM7 467 aaPredicted RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 SP140LQ9H930 580 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 XAB2Q9HCS7 855 aaKnown RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 C20orf141Q9NUB4 165 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 B3GNT2Q9NY97 397 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 KIAA1456Q9P272 454 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 CES1P1Q9UKY3 287 aa4.59□□□□□ -1.67
TCF4-213ENST00000562543 KLK5Q9Y337 293 aaPredicted RBP4.59□□□□□ -1.67
TCF4-213ENST00000562543 hCG_1818297A0A087WSY0 165 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 LOC105371267A0A1B0GV96 52 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 WDR91A4D1P6 747 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 FAM25AB3EWG3 89 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 FAM25CB3EWG5 89 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 FAM25GB3EWG6 89 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 H3BSA7 217 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 APOC4-APOC2K7ER74 178 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 DNALI1O14645 258 aaPredicted RBP4.58□□□□□ -1.68
TCF4-213ENST00000562543 NPFFO15130 113 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 TAPBPO15533 448 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 PSMD3O43242 534 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 PSTPIP1O43586 416 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 DNPH1O43598 174 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 VAPBO95292 243 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 IGKV1D-16P01601 117 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 APOC2P02655 101 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 ALDOBP05062 364 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 ENO1P06733 434 aaKnown RBP4.58□□□□□ -1.68
TCF4-213ENST00000562543 NGFRP08138 427 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 ATP6V1B1P15313 513 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 CTRB1P17538 263 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 IL12AP29459 219 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 SAA4P35542 130 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 BMXP51813 675 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 LGALS4P56470 323 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 CLRN1P58418 232 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 ERVS71-1P61550 626 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 TIAL1Q01085 375 aaKnown RBP eCLIP4.58□□□□□ -1.68
TCF4-213ENST00000562543 FHL3Q13643 280 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 SLC17A1Q14916 467 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 TOMM34Q15785 309 aaPredicted RBP4.58□□□□□ -1.68
TCF4-213ENST00000562543 LRRC75BQ2VPJ9 315 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 ARHGAP11BQ3KRB8 267 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 SLC25A53Q5H9E4 307 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 LRRC38Q5VT99 294 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 LPCAT4Q643R3 524 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 CTRB2Q6GPI1 263 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 CYP20A1Q6UW02 462 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 HDDC2Q7Z4H3 204 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 ADAMTSL2Q86TH1 951 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 AKAP14Q86UN6 197 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 MISPQ8IVT2 679 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 RNF175Q8N4F7 328 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 LSMEM1Q8N8F7 131 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 RAB2BQ8WUD1 216 aa4.58□□□□□ -1.68
TCF4-213ENST00000562543 C12orf43Q96C57 262 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms