RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 SP4Q02446 784 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RGS1Q08116 209 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CD47Q08722 323 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 C2orf80Q0P641 193 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ELAVL2Q12926 359 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 GTF2H2Q13888 395 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KIAA0141Q14154 515 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 NFATC4Q14934 902 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TSNQ15631 228 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 NSDHLQ15738 373 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 HSPB2Q16082 182 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 NRF1Q16656 503 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RFTN2Q52LD8 501 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 OTUD1Q5VV17 481 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 NSUN5P2Q63ZY6 315 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 GTF2H2CQ6P1K8 395 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 C8orf82Q6P1X6 216 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 PNCKQ6P2M8 343 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CD200R1LQ6Q8B3 271 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 SMARCD3Q6STE5 483 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RNF165Q6ZSG1 346 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 Q6ZVL8 140 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 DOK3Q7L591 496 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 STRADAQ7RTN6 431 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 NRARPQ7Z6K4 114 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ZNF761Q86XN6 746 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KIR2DL5AQ8N109 375 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ST6GALNAC3Q8NDV1 305 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TMEM52Q8NDY8 209 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 OR10Q1Q8NGQ4 319 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 OR52I2Q8NH67 350 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KIR2DL5BQ8NHK3 375 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 FAM110BQ8TC76 370 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ZFAND1Q8TCF1 268 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ADAMTS17Q8TE56 1095 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TNFAIP8L1Q8WVP5 186 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ACOT12Q8WYK0 555 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 OVCA2Q8WZ82 227 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TFGQ92734 400 aaPredicted RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RORBQ92753 470 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TFAP2CQ92754 450 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RBPMSQ93062 196 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 HPDLQ96IR7 371 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 ZNF354BQ96LW1 612 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 GPR78Q96P69 363 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 IL4I1Q96RQ9 567 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 JMJD8Q96S16 334 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 FEVQ99581 238 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 COPS8Q99627 209 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 GPR22Q99680 433 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 CCDC32Q9BV29 185 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 DHX35Q9H5Z1 703 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RPF2Q9H7B2 306 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 TAS2R13Q9NYV9 303 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RCC2Q9P258 522 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 KIAA1456Q9P272 454 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 DNMT3BQ9UBC3 853 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 IKZF2Q9UKS7 526 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 FBXO5Q9UKT4 447 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 MRPS28Q9Y2Q9 187 aaKnown RBP4.91□□□□□ -1.62
CAPN3-211ENST00000562199 UFC1Q9Y3C8 167 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RALGAPA2Q2PPJ7 1873 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 RLFQ13129 1914 aa4.91□□□□□ -1.62
CAPN3-211ENST00000562199 FNDC1Q4ZHG4 1894 aaPredicted RBP4.9□□□□□ -1.62
CAPN3-211ENST00000562199 PLXNA1Q9UIW2 1896 aa4.9□□□□□ -1.62
CAPN3-211ENST00000562199 IGKV6-21A0A0C4DH24 114 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 A0A1W2PRD5 423 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 GXYLT2A0PJZ3 443 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 ANTXRLA6NF34 631 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 OR5H14A6NHG9 310 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 SHISA7A6NL88 538 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 BBIP1A8MTZ0 92 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 FTCDNL1E5RQL4 147 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 E7ENX8 843 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 PPP5D1E7EU14 171 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 K7ERU9 68 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 M0QZ24 198 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 M0R3G1 203 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 TNFSF11O14788 317 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 PDE6DO43924 150 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 SNAP91O60641 907 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 TNFSF15O95150 251 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 ZNF205O95201 554 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 GADD45GO95257 159 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 HPP00738 406 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 IGHG4P01861 327 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 GAPDHP04406 335 aaKnown RBP4.9□□□□□ -1.63
CAPN3-211ENST00000562199 CYBBP04839 570 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 WNT2P09544 360 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 SBK3P0C264 359 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 C8orf88P0DMB2 117 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 CXCL8P10145 99 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 GPX2P18283 190 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 MAKP20794 623 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 AK4P27144 223 aaPredicted RBP4.9□□□□□ -1.63
CAPN3-211ENST00000562199 EPHA2P29317 976 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 GGT2P36268 569 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 SLC6A8P48029 635 aa4.9□□□□□ -1.63
CAPN3-211ENST00000562199 ASCL1P50553 236 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms