RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 OGG1O15527 345 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 P2RX6O15547 441 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 CTSVO60911 334 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 F10P00742 488 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 FCGR3AP08637 254 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 SLC35G6P0C7Q6 338 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 CSNK2A2P19784 350 aaPredicted RBP11.99□□□□□ -0.49
CLK3-206ENST00000562078 MC3RP41968 323 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 TNFRSF9Q07011 255 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 SRSF4Q08170 494 aaKnown RBP11.99□□□□□ -0.49
CLK3-206ENST00000562078 TMEM64Q6YI46 380 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 OR4K17Q8NGC6 315 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 GPR148Q8TDV2 347 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 MAFIPQ8WZ33 124 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 SLC22A18Q96BI1 424 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 ELF4Q99607 663 aaPredicted RBP11.99□□□□□ -0.49
CLK3-206ENST00000562078 OR52D1Q9H346 318 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 MMACHCQ9Y4U1 282 aa11.99□□□□□ -0.49
CLK3-206ENST00000562078 IGHV1OR15-9A0A0B4J2B8 117 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 PRAMEF26H0Y7S4 382 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 EREGO14944 169 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 HLA-AP01891 365 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 DCNP07585 359 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 TSFMP43897 325 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 SULT1A1P50225 295 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 CCR5P51681 352 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 YPEL5P62699 121 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SIRPAP78324 504 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 TGM3Q08188 693 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 ST3GAL3Q11203 375 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 FOXO1Q12778 655 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 KIR2DS3Q14952 304 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 ZNF542PQ5EBM4 170 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 OR2A2Q6IF42 318 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SPNS3Q6ZMD2 512 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SPEM1Q8N4L4 309 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SFXN5Q8TD22 340 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 RELTQ969Z4 430 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 C16orf58Q96GQ5 468 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 DUSP22Q9NRW4 184 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SLC22A31A6NKX4 558 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SOX15O60248 233 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 EDNRAP25101 427 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 RPS10P46783 165 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 NHLH2Q02577 135 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 BIKQ13323 160 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 ODF4Q2M2E3 257 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 ZNF385CQ66K41 422 aaPredicted RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 STEAP1BQ6NZ63 245 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 DRAM2Q6UX65 266 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 VRK2Q86Y07 508 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 DEFB119Q8N690 84 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 C19orf47Q8N9M1 422 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 ST7LQ8TDW4 575 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 DCUN1D4Q92564 292 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 RRNAD1Q96FB5 475 aaKnown RBP11.98□□□□□ -0.49
CLK3-206ENST00000562078 DPH1Q9BZG8 443 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 GPR61Q9BZJ8 451 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 WNT5BQ9H1J7 359 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 ATG5Q9H1Y0 275 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 PTGES2Q9H7Z7 377 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 OR2S2Q9NQN1 319 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 SIT1Q9Y3P8 196 aa11.98□□□□□ -0.49
CLK3-206ENST00000562078 CEP192Q8TEP8 1941 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 FAM221BA6H8Z2 402 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 EEF1E1-BLOC1S5C9J1V9 151 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 M0QYG6 137 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 FBXO24O75426 580 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 SERPINA5P05154 406 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 CELA2BP08218 269 aaPredicted RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 PVRP15151 417 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 DEFB134Q4QY38 66 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 ZNF311Q5JNZ3 666 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 ATPAF1Q5TC12 328 aaPredicted RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 FBXO42Q6P3S6 717 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 TMPRSS11FQ6ZWK6 438 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 PRR18Q8N4B5 295 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 OR56A1Q8NGH5 318 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 EDAQ92838 391 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 SMIM8Q96KF7 97 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 KRCC1Q9NPI7 259 aaPredicted RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 TAS2R8Q9NYW2 309 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 GNG8Q9UK08 70 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 CSAG2Q9Y5P2 127 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 HS3ST3A1Q9Y663 406 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 KCNE3Q9Y6H6 103 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 ZNF780BQ9Y6R6 833 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 THADAQ6YHU6 1953 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 TEX13DA0A0J9YY54 714 aaPredicted RBP11.97□□□□□ -0.49
CLK3-206ENST00000562078 BHLHE40O14503 412 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 SFTPBP07988 381 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 SOD3P08294 240 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 PAX1P15863 534 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 RABIFP47224 123 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 KHDC3LQ587J8 217 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 FCRL6Q6DN72 434 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 LPCAT3Q6P1A2 487 aa11.97□□□□□ -0.49
CLK3-206ENST00000562078 FIGLAQ6QHK4 219 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms