RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 AKR1C4P17516 323 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 HTRA3P83110 453 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 TOMM34Q15785 309 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 OR52W1Q6IF63 320 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 MAMDC2Q7Z304 686 aaPredicted RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 MARCH3Q86UD3 253 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 GVQW1Q8N7I0 195 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 GABRG3Q99928 467 aa12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 ADAT1Q9BUB4 502 aaKnown RBP12.55□□□□□ -0.4
VPS9D1-202ENST00000561976 RAB19A4D1S5 217 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 METTL21EPA6NDL7 271 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 C17orf51A8MQB3 221 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 BGLAPP02818 100 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 CTLA4P16410 223 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 IGFBP3P17936 291 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 AKT2P31751 481 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 VEGFBP49765 207 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 C1orf61Q13536 156 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 PRTGQ2VWP7 1150 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 WNT2BQ93097 391 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 CMBLQ96DG6 245 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 OR8D2Q9GZM6 311 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 S1PR5Q9H228 398 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 TRAV36DV7A0A075B6V5 113 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 KIR2DS5A0A0G2JLQ3 304 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 A0A0G2JNG1 304 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 F8W036 122 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 KIR2DS3K7RE56 304 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF208O43345 1280 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 STK17BO94768 372 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 PVALBP20472 110 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 BLOC1S1P78537 153 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 INSM1Q01101 510 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 ROM1Q03395 351 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF117Q03924 483 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 KIR2DS5Q14953 304 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 OR7A5Q15622 319 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 OR13H1Q8NG92 308 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 C8orf44Q96CB5 159 aa12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 FOXRED1Q96CU9 486 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF107Q9UII5 783 aaPredicted RBP12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 KIAA0100Q14667 2235 aaKnown RBP12.54□□□□□ -0.4
VPS9D1-202ENST00000561976 A0A0A6YYH2 397 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 LOC107986453A0A1B0GWG9 222 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 A6NJ64 397 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 ICOSLGO75144 302 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 MPZL1O95297 269 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 CLPSP04118 112 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 PGAM2P15259 253 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 FSTP19883 344 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 SCRN3Q0VDG4 424 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 SLC22A6Q4U2R8 563 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 OR4D6Q8NGJ1 314 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 MITD1Q8WV92 249 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 FAM46BQ96A09 425 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 RTN4RQ9BZR6 473 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 ADAM19Q9H013 955 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 GMEB2Q9UKD1 530 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 BLACEA4D250 179 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 CDC14CA4D256 554 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 EIF1AYO14602 144 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 LMX1BO60663 402 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 ERCC1P07992 297 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 EIF1AXP47813 144 aaKnown RBP12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 SLC6A8P48029 635 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 HSD17B7P56937 341 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 TMEM71Q6P5X7 295 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 OR52N5Q8NH56 324 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 GPBAR1Q8TDU6 330 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 NUDCD2Q8WVJ2 157 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 DCUN1D4Q92564 292 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 LAT2Q9GZY6 243 aa12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 GDF2Q9UK05 429 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 COA3Q9Y2R0 106 aaPredicted RBP12.53□□□□□ -0.4
VPS9D1-202ENST00000561976 IGLV1-36A0A0B4J1U3 117 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF98A6NK75 572 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 LDLRAD4O15165 306 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 NSA2O95478 260 aaKnown RBP12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 IFNA6P05013 189 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 CTSEP14091 401 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 MAOBP27338 520 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 PPICP45877 212 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 YPEL5P62699 121 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 ADAD2Q8NCV1 583 aaKnown RBP12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 OR4K17Q8NGC6 315 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 OR5AP2Q8NGF4 316 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 ADAMTS18Q8TE60 1221 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 MRGPRX1Q96LB2 322 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 GAS2L1Q99501 681 aaPredicted RBP12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 ZNF768Q9H5H4 540 aaKnown RBP12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 FBRSQ9HAH7 460 aa12.52□□□□□ -0.4
VPS9D1-202ENST00000561976 CHMP1AQ9HD42 196 aaPredicted RBP12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms