RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 ZFP41Q8N8Y5 198 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 MDS2Q8NDY4 140 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 PIK3IP1Q96FE7 263 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 TGS1Q96RS0 853 aaKnown RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 P2RX4Q99571 388 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 BPIFA3Q9BQP9 254 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 STOX2Q9P2F5 926 aaPredicted RBP4.06□□□□□ -1.76
SMG1-204ENST00000561940 SHPKQ9UHJ6 478 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 TMED5Q9Y3A6 229 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 GCC2Q8IWJ2 1684 aa4.06□□□□□ -1.76
SMG1-204ENST00000561940 XKRYO14609 159 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 CA11O75493 328 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 OR2F2O95006 317 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 BGLAPP02818 100 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 ACSM4P0C7M7 580 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 PNMA6AP0CW24 399 aaPredicted RBP4.05□□□□□ -1.76
SMG1-204ENST00000561940 RRM2P31350 389 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 ZNF136P52737 540 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 CRISP1P54107 249 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 LIPEQ05469 1076 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 MERTKQ12866 999 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 MADCAM1Q13477 382 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 PIGGQ5H8A4 983 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 C22orf42Q6IC83 251 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 NCCRP1Q6ZVX7 275 aaPredicted RBP4.05□□□□□ -1.76
SMG1-204ENST00000561940 BZW1Q7L1Q6 419 aaKnown RBP4.05□□□□□ -1.76
SMG1-204ENST00000561940 CENPQQ7L2Z9 268 aaPredicted RBP4.05□□□□□ -1.76
SMG1-204ENST00000561940 C6orf120Q7Z4R8 191 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 CMTM1Q8IZ96 169 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 IQCKQ8N0W5 287 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 MREGQ8N565 214 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 OR4C5Q8NGB2 326 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 CAPSLQ8WWF8 208 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 ZNF799Q96GE5 643 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 SH3GL3Q99963 347 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 C11orf70Q9BRQ4 267 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 MRPL37Q9BZE1 423 aaKnown RBP4.05□□□□□ -1.76
SMG1-204ENST00000561940 ST3GAL6Q9Y274 331 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 IQGAP3Q86VI3 1631 aa4.05□□□□□ -1.76
SMG1-204ENST00000561940 ABCA3Q99758 1704 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 PARP4Q9UKK3 1724 aaKnown RBP4.04□□□□□ -1.76
SMG1-204ENST00000561940 PAPPAQ13219 1627 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 IGKV6D-21A0A0A0MT36 114 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 NKX2-6A6NCS4 301 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 PES1O00541 588 aaKnown RBP4.04□□□□□ -1.76
SMG1-204ENST00000561940 CACNG3O60359 315 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 SLC25A27O95847 323 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 CALM1P0DP23 149 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 CALM2P0DP24 149 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 CALM3P0DP25 149 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 ANXA8P13928 327 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 MGMTP16455 207 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 GTF2E2P29084 291 aaKnown RBP4.04□□□□□ -1.76
SMG1-204ENST00000561940 OTX1P32242 354 aaPredicted RBP4.04□□□□□ -1.76
SMG1-204ENST00000561940 MAS1LP35410 378 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 ANXA8L1Q5VT79 327 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 CERS6Q6ZMG9 384 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 TMEM179Q6ZVK1 233 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 EIF3MQ7L2H7 374 aaKnown RBP4.04□□□□□ -1.76
SMG1-204ENST00000561940 PRELID2Q8N945 189 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 FAM3DQ96BQ1 224 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 PRRC1Q96M27 445 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 SERPINB12Q96P63 405 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 TSSK3Q96PN8 268 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 TAAR1Q96RJ0 339 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 ANP32EQ9BTT0 268 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 EXO5Q9H790 373 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 GPATCH2LQ9NWQ4 482 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 GOLT1BQ9Y3E0 138 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 WSB1Q9Y6I7 421 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 DAPK1P53355 1430 aa4.04□□□□□ -1.76
SMG1-204ENST00000561940 NUP155O75694 1391 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 INSRP06213 1382 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 MYO5BQ9ULV0 1848 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 SIRPB1O00241 398 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 WRBO00258 174 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 GNAO1P09471 354 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 OR8G3PP0DMU2 310 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 SMIM10L1P0DMW3 83 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 SFTPCP11686 197 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 FOXN2P32314 431 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 SLC1A1P43005 524 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 MXD1Q05195 221 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 CLINT1Q14677 625 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 CLEC2AQ6UVW9 174 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 ZNF493Q6ZR52 646 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 STRADAQ7RTN6 431 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 SCD5Q86SK9 330 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 LUZP2Q86TE4 346 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 BIVMQ86UB2 503 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 CD300LFQ8TDQ1 290 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 GIMAP1Q8WWP7 306 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 STARD8Q92502 1023 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 SMIM10Q96HG1 83 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 WFIKKN1Q96NZ8 548 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 RETNQ9HD89 108 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 UXTQ9UBK9 157 aaPredicted RBP4.03□□□□□ -1.76
SMG1-204ENST00000561940 SPATA31E1Q6ZUB1 1445 aa4.03□□□□□ -1.76
SMG1-204ENST00000561940 PHLPP2Q6ZVD8 1323 aa4.02□□□□□ -1.77
SMG1-204ENST00000561940 TRAV39A0A0B4J263 110 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms