RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 TIMM23O14925 209 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 LCMT2O60294 686 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 OR10H3O60404 316 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 HCN1O60741 890 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ZNF354AO60765 605 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 FMO6PO60774 539 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SH3BGRLO75368 114 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 UGT2B17O75795 530 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 LY6HO94772 140 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 GPR75O95800 540 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 TBX6O95947 436 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 LGI1O95970 557 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 BCL10O95999 233 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 GBAP04062 536 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ATP1B1P05026 303 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 HMGN1P05114 100 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 HMGN2P05204 90 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 CLEC3BP05452 202 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 DBIP07108 87 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 SLC35E2P0CK97 266 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SMIM10L1P0DMW3 83 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 PIPP12273 146 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 POU2F1P14859 743 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 PORP16435 677 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 ZNF12P17014 697 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ALOX12P18054 663 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CNR1P21554 472 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 MDKP21741 143 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 PRKACGP22612 351 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CPN2P22792 545 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 AQP1P29972 269 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 GCH1P30793 250 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 GGT2P36268 569 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 UGT2B10P36537 528 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CD79BP40259 229 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CAPZA2P47755 286 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 DNASE1L1P49184 302 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 XKP51811 444 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 UGT2B15P54855 530 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 PSMD4P55036 377 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 SLC26A5P58743 744 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 COPZ1P61923 177 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SNRPGP62308 76 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 UBA52P62987 128 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 SLC35A2P78381 396 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 BTN3A2P78410 334 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 IL1RL1Q01638 556 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SPIBQ01892 262 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 TNFRSF17Q02223 184 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CD47Q08722 323 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ST3GAL3Q11203 375 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 HSPB3Q12988 150 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 KRR1Q13601 381 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 FAM53BQ14153 422 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 FGFBP1Q14512 234 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 MAD2L1BPQ15013 274 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 TRAM2Q15035 370 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 RAB35Q15286 201 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ZNHIT3Q15649 155 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 NEDD8Q15843 81 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CARTPTQ16568 116 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 MOGQ16653 247 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 DGUOKQ16854 277 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 PGGHGQ32M88 737 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 EIPR1Q53HC9 387 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 DMRTC1Q5HYR2 192 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 DEFB121Q5J5C9 76 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 NSUN5P2Q63ZY6 315 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 FRMPD2BQ6IN97 320 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ADNP2Q6IQ32 1131 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 RPL13AP3Q6NVV1 102 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 DHRS4L2Q6PKH6 230 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 KLHL24Q6TFL4 600 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CASP12Q6UXS9 341 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 GDPGP1Q6ZNW5 385 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SHFQ7M4L6 423 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 C16orf62Q7Z3J2 963 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 VTCN1Q7Z7D3 282 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 GALNT5Q7Z7M9 940 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CDK20Q8IZL9 346 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 RNF113BQ8IZP6 322 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 GCNT2Q8N0V5 402 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 LRRC25Q8N386 305 aaPredicted RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 RNF175Q8N4F7 328 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CSNK1A1LQ8N752 337 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 CDRT4Q8N9R6 151 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 TMEM116Q8NCL8 245 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ZNF540Q8NDQ6 660 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 BPIFB6Q8NFQ5 453 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 OR8J1Q8NGP2 316 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 OR9Q1Q8NGQ5 310 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 OR14A16Q8NHC5 309 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 TMEM163Q8TC26 289 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 ELP5Q8TE02 316 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 UTP15Q8TED0 518 aaKnown RBP2.77□□□□□ -1.97
SPG11-225ENST00000561391 S100ZQ8WXG8 99 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 OSTF1Q92882 214 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 SLC38A4Q969I6 547 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 BORCS5Q969J3 196 aa2.77□□□□□ -1.97
SPG11-225ENST00000561391 MAL2Q969L2 176 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms