RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 TUBB1Q9H4B7 451 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 C12orf10Q9HB07 376 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 TBCCD1Q9NVR7 557 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 PNPOQ9NVS9 261 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 CALML5Q9NZT1 146 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 KLHL14Q9P2G3 628 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ZNF232Q9UNY5 417 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 ZNF443Q9Y2A4 671 aaPredicted RBP7.83□□□□□ -1.16
HERC1-210ENST00000560897 MAB21L2Q9Y586 359 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 DNAJC15Q9Y5T4 150 aa7.83□□□□□ -1.16
HERC1-210ENST00000560897 MEIOCA2RUB1 952 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 NPFFO15130 113 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 SNNO75324 88 aaPredicted RBP7.82□□□□□ -1.16
HERC1-210ENST00000560897 IGHG1P01857 330 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 CHRM2P08172 466 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 MMP7P09237 267 aaPredicted RBP7.82□□□□□ -1.16
HERC1-210ENST00000560897 ADORA3P0DMS8 318 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 ZNF32P17041 273 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 ZNF181Q2M3W8 571 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 FAM201AQ5SY85 155 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 ANXA8L1Q5VT79 327 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 KANK2Q63ZY3 851 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 UNQ9370/PRO34162Q6UXP9 181 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 ZNF841Q6ZN19 808 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 Q6ZR03 302 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 SLC35D2Q76EJ3 337 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 CMTM4Q8IZR5 234 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 TRIML2Q8N7C3 387 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 OR10AD1Q8NGE0 317 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 OR11L1Q8NGX0 322 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 OR6S1Q8NH40 331 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 AKR7LQ8NHP1 331 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 SLC41A3Q96GZ6 507 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 SLC25A44Q96H78 314 aaPredicted RBP7.82□□□□□ -1.16
HERC1-210ENST00000560897 MEGF10Q96KG7 1140 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 C4orf45Q96LM5 186 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 ASCL2Q99929 193 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 SIKE1Q9BRV8 207 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 NUF2Q9BZD4 464 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 FAM107BQ9H098 131 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 MRPL39Q9NYK5 338 aaKnown RBP7.82□□□□□ -1.16
HERC1-210ENST00000560897 ONECUT1Q9UBC0 465 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 GIMAP2Q9UG22 337 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 KPTNQ9Y664 436 aa7.82□□□□□ -1.16
HERC1-210ENST00000560897 HERC2O95714 4834 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 LOC100509620A0A075B734 347 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 A0A0G2JND7 137 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 A0A1W2PRD5 423 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 A0A1W2PRF3 423 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 A0A1W2PRM7 423 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 GMNCA6NCL1 334 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 ADARB2-AS1A8MUL3 147 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 JTBO76095 146 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 ECDO95905 644 aaPredicted RBP7.81□□□□□ -1.16
HERC1-210ENST00000560897 LBPP18428 481 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 KITLGP21583 273 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 TUBG1P23258 451 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 PSMB10P40306 273 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 STX1BP61266 288 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 CDONQ4KMG0 1287 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 ALG10BQ5I7T1 473 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 LRFN4Q6PJG9 635 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 LIAT1Q6ZQX7 453 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 IGFN1Q86VF2 1251 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 RIMKLAQ8IXN7 391 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 CLIP4Q8N3C7 705 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 C8orf46Q8TAG6 207 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 SLC7A13Q8TCU3 470 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 DNAJA4Q8WW22 397 aaPredicted RBP7.81□□□□□ -1.16
HERC1-210ENST00000560897 CMBLQ96DG6 245 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 ZNF607Q96SK3 696 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 ZBTB18Q99592 522 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 SSX3Q99909 188 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 SIAEQ9HAT2 523 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 SIRT7Q9NRC8 400 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 TUBG2Q9NRH3 451 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 P2RX2Q9UBL9 471 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 NDRG4Q9ULP0 352 aaKnown RBP7.81□□□□□ -1.16
HERC1-210ENST00000560897 TMCC3Q9ULS5 477 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
HERC1-210ENST00000560897 IGHV3-64DA0A0J9YX35 117 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 PRSS51A0A1B0GVH4 220 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 TMEM247A6NEH6 219 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 TMEM233B4DJY2 109 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 PLPP3O14495 311 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 ADAM20O43506 726 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 RNF13O43567 381 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 OR10H3O60404 316 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 EDF1O60869 148 aaKnown RBP7.8□□□□□ -1.16
HERC1-210ENST00000560897 BGLAPP02818 100 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 ZNF26P17031 533 aaPredicted RBP7.8□□□□□ -1.16
HERC1-210ENST00000560897 PAICSP22234 425 aaKnown RBP7.8□□□□□ -1.16
HERC1-210ENST00000560897 CRISP3P54108 245 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 GYS2P54840 703 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 CLDN8P56748 225 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 NCALDP61601 193 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 ERVK-25P63136 954 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 HOXC5Q00444 222 aa7.8□□□□□ -1.16
HERC1-210ENST00000560897 GABPB1Q06547 395 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms