RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 GYPBP06028 91 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 LCKP06239 509 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 ADRA2AP08913 450 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 DBHP09172 617 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 CLUP10909 449 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 SPI1P17947 270 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 FASP25445 335 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 POU1F1P28069 291 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 ALDH3B1P43353 468 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 KPNB1Q14974 876 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 MAD2L1BPQ15013 274 aaPredicted RBP13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 KRTAP27-1Q3LI81 207 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 SLC27A4Q6P1M0 643 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 CFAP77Q6ZQR2 320 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 LINC00346Q8IVM7 164 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 SYNPRQ8TBG9 265 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 SLC25A40Q8TBP6 338 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 DNAJC9Q8WXX5 260 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 C4orf45Q96LM5 186 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 MED20Q9H944 212 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF556Q9HAH1 456 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 PNRC2Q9NPJ4 139 aaKnown RBP13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 TBCCD1Q9NVR7 557 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 DUSP13Q9UII6 198 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 ABCA1O95477 2261 aa13.08□□□□□ -0.32
SNRPA1-213ENST00000560856 SETD2Q9BYW2 2564 aaPredicted RBP13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 TVP23AA6NH52 213 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 RIIAD1A6NNX1 92 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 H3BNX3 289 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 M0R233 179 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 IFNGP01579 166 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 IGHV3-13P01766 116 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 MPV17P39210 176 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 RPS27P42677 84 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 ARHGDIAP52565 204 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 DSCR9P59020 149 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 PCK2Q16822 640 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 ELFN2Q5R3F8 820 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 TMEM236Q5W0B7 351 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 HIPK1Q86Z02 1210 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 PARP8Q8N3A8 854 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF511Q8NB15 262 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 PROKR2Q8NFJ6 384 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 OR10S1Q8NGN2 331 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 C10orf105Q8TEF2 133 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 PYDC1Q8WXC3 89 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 MAP6Q96JE9 813 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 COQ7Q99807 217 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 REG4Q9BYZ8 158 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 OR2J1Q9GZK6 312 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 GABARAPL1Q9H0R8 117 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 RAB1BQ9H0U4 201 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 POFUT1Q9H488 388 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 WDR76Q9H967 626 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 TAAR3PQ9P1P4 343 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 EIF3KQ9UBQ5 218 aaKnown RBP13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 KCNG2Q9UJ96 466 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 POLR1DQ9Y2S0 133 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 COMMD3-BMI1R4GMX3 469 aa13.07□□□□□ -0.32
SNRPA1-213ENST00000560856 FAM183AA6NL82 134 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 RNF223E7ERA6 249 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 G3V2T6 193 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 SURF4O15260 269 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 MITFO75030 526 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 HMGN1P05114 100 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 FCGR1AP12314 374 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF3P17036 446 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 CRISP1P54107 249 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 KLF3P57682 345 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 PPP1CBP62140 327 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 ZNF718Q3SXZ3 478 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 TEX30Q5JUR7 227 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 MBNL2Q5VZF2 373 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 KDM4DQ6B0I6 523 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 C1orf174Q8IYL3 243 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 ABHD4Q8TB40 342 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 KLF14Q8TD94 323 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 NEU4Q8WWR8 484 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 CENPNQ96H22 339 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 HDHD2Q9H0R4 259 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 MS4A5Q9H3V2 200 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 ELOVL3Q9HB03 270 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 DYNLRB1Q9NP97 96 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 PAPOLBQ9NRJ5 636 aaKnown RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 TMEFF2Q9UIK5 374 aaPredicted RBP13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 STARD10Q9Y365 291 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 GRIP1Q9Y3R0 1128 aa13.06□□□□□ -0.32
SNRPA1-213ENST00000560856 CR1P17927 2039 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 VWC2LB2RUY7 222 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 H3BSA7 217 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 SMAD7O15105 426 aaKnown RBP13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 ABHD16AO95870 558 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 HLA-DQA2P01906 255 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 EPHA2P29317 976 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 FMO3P31513 532 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 KRTAP1-1Q07627 177 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 ALKBH6Q3KRA9 238 aa13.05□□□□□ -0.32
SNRPA1-213ENST00000560856 CLEC2AQ6UVW9 174 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms