RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 TRUB1Q8WWH5 349 aaKnown RBP12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 DOK1Q99704 481 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 CCL19Q99731 98 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 FN3KQ9H479 309 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 MOKQ9UQ07 419 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 COA3Q9Y2R0 106 aaPredicted RBP12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 COMMD3-BMI1R4GMX3 469 aa12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
PKNOX1-209ENST00000560448 IGHV2OR16-5A0A0B4J2B6 119 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ICMTO60725 284 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 PLAUP00749 431 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 GAAP10253 952 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF35P13682 527 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 PAX1P15863 534 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF32P17041 273 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 PCSK6P29122 969 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 APOBEC3AP31941 199 aaPredicted RBP12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 APLNRP35414 380 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC15A1P46059 708 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 GP2P55259 537 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ENDOGQ14249 297 aaKnown RBP12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ETFDHQ16134 617 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 OCLNQ16625 522 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC25A30Q5SVS4 291 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 AGAP6Q5VW22 663 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ACSM5Q6NUN0 579 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 AHSA2Q719I0 299 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 CLVS1Q8IUQ0 354 aaPredicted RBP12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 LRRC75A-AS1Q8N1F1 130 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC30A7Q8NEW0 376 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 PROKR2Q8NFJ6 384 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 GJC3Q8NFK1 279 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 SLC26A10Q8NG04 563 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF420Q8TAQ5 688 aaPredicted RBP12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 TMEM171Q8WVE6 324 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 PLEKHA8Q96JA3 519 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF416Q9BWM5 594 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 NMNAT2Q9BZQ4 307 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 NOX3Q9HBY0 568 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 CA10Q9NS85 328 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 CADP27708 2225 aa12.12□□□□□ -0.47
PKNOX1-209ENST00000560448 CCDC160A6NGH7 325 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 TRIM64BA6NI03 449 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ATP6V1G2-DDX39BF2Z307 99 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 J3QW42 95 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PRODHO43272 600 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 INMTO95050 263 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CDK1P06493 297 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 DANCRP0C864 163 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CD53P19397 219 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 TUBG1P23258 451 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 MAP2K4P45985 399 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 MVKQ03426 396 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CRMP1Q14194 572 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PABPC1L2AQ5JQF8 200 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ARL9Q6T311 187 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ZNF584Q8IVC4 421 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 FBXL14Q8N1E6 418 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SVOPQ8N4V2 548 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 IQCF1Q8N6M8 205 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 OR10H5Q8NGA6 315 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 OR8J1Q8NGP2 316 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 IGFBPL1Q8WX77 278 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 FBXO17Q96EF6 278 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 MYCBPQ99417 103 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 TSC22D3Q99576 134 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 FOXC2Q99958 501 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 COPS4Q9BT78 406 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CCDC90BQ9GZT6 254 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 RERGLQ9H628 205 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SRA1Q9HD15 236 aaKnown RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ACOT13Q9NPJ3 140 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 TUBG2Q9NRH3 451 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CLN6Q9NWW5 311 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PTTG2Q9NZH5 202 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 POLR1DQ9Y2S0 133 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ATP23Q9Y6H3 246 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ITPR2Q14571 2701 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 ABCA12Q86UK0 2595 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PRR23D1E9PI22 279 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 DCTN6O00399 190 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SURF4O15260 269 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SGCEO43556 437 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PRKYO43930 277 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 HLA-DQA2P01906 255 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 CELA3BP08861 270 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PRR23D2P0DMB1 279 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 NR4A1P22736 598 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 STOMP27105 288 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 GLRXP35754 106 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 RAD52P43351 418 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 EVX1P49640 407 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 NUDT6P53370 316 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 NKX6-1P78426 367 aaPredicted RBP12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 PSG4Q00888 419 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 SPOCK1Q08629 439 aa12.11□□□□□ -0.47
PKNOX1-209ENST00000560448 IRF3Q14653 427 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms