RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 ANGPT2O15123 496 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 SURF4O15260 269 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 SNX3O60493 162 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 TRMUO75648 421 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 MMP9P14780 707 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 KITLGP21583 273 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 ARHGDIAP52565 204 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 EGR3Q06889 387 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 NFYCQ13952 458 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 TAF11Q15544 211 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 ZNF404Q494X3 552 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 RABL3Q5HYI8 236 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 WDR25Q64LD2 544 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 ZNF841Q6ZN19 808 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 GDPGP1Q6ZNW5 385 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 CALHM3Q86XJ0 350 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 LDLRAD3Q86YD5 345 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 VANGL1Q8TAA9 524 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 ASB10Q8WXI3 467 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 GATAD2BQ8WXI9 593 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 PPP1R14AQ96A00 147 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 TMEM38AQ9H6F2 299 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 KAT8Q9H7Z6 458 aaKnown RBP10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 NANSQ9NR45 359 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 AURKAIP1Q9NWT8 199 aaPredicted RBP10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 CLN8Q9UBY8 286 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 CAPN7Q9Y6W3 813 aa10.62□□□□□ -0.71
RABGGTA-213ENST00000560127 A0A0U1RQK1 487 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 ZNF816-ZNF321PA0A0X1KG74 233 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 CENPBD1B2RD01 187 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 IFNL4K9M1U5 179 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 MRASO14807 208 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 ENSAO43768 121 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 TSPAN9O75954 239 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 ASAH2BP0C7U1 165 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 ACADSP16219 412 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 FUT4P22083 530 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 ERFP50548 548 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 GNGT1P63211 74 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 CDK6Q00534 326 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 SGCAQ16586 387 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 OXLD1Q5BKU9 147 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 COQ5Q5HYK3 327 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 FAM201AQ5SY85 155 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 NANOGP8Q6NSW7 305 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 C11orf87Q6NUJ2 197 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 LYPD2Q6UXB3 125 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 NLRC3Q7RTR2 1065 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 RCN3Q96D15 328 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 NMD3Q96D46 503 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 CMBLQ96DG6 245 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 FAM107BQ9H098 131 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 RASSF4Q9H2L5 321 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 NECAP2Q9NVZ3 263 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 SACSQ9NZJ4 4579 aa10.61□□□□□ -0.71
RABGGTA-213ENST00000560127 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 LOC100653049A0A140TA62 436 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 GMNCA6NCL1 334 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 ZNF879B4DU55 563 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 PHYHO14832 338 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 SLC22A2O15244 555 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 GPR37O15354 613 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 KRT34O76011 436 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 TOX4O94842 621 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 LYPD3O95274 346 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 FSTL3O95633 263 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 ABHD16AO95870 558 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 THY1P04216 161 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 F13BP05160 661 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 GSTM3P21266 225 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 PPIBP23284 216 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 UGT2B15P54855 530 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 FMODQ06828 376 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 SCARB2Q14108 478 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 FAM27BQ5VT28 67 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 DHRS7BQ6IAN0 325 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 C8orf82Q6P1X6 216 aaPredicted RBP10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 ZNF613Q6PF04 617 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 PIGWQ7Z7B1 504 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 ALDH16A1Q8IZ83 802 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 GPR32P1Q8NGA4 272 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 NSMAFQ92636 917 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 MEGF10Q96KG7 1140 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 SPATA5L1Q9BVQ7 753 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 TRIM15Q9C019 465 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 RAD21L1Q9H4I0 556 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 KIF17Q9P2E2 1029 aa10.6□□□□□ -0.71
RABGGTA-213ENST00000560127 A0A1W2PRG6 482 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 BBIP1A8MTZ0 92 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 MCIDASD6RGH6 385 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 BLOC1S5-TXNDC5H3BN57 136 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 KPNA4O00629 521 aaPredicted RBP10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 CHP2O43745 196 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 HIST1H2ABP04908 130 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 COX4I1P13073 169 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 SLC6A2P23975 617 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 LAP3P28838 519 aa10.59□□□□□ -0.71
RABGGTA-213ENST00000560127 AQP1P29972 269 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms