RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 NCK1P16333 377 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 NOS3P29474 1203 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 PSG7Q13046 419 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 CDK5R2Q13319 367 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 ENDOGQ14249 297 aaKnown RBP10.67□□□□□ -0.7
SNX1-209ENST00000559961 SLC36A3Q495N2 470 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 C1QL2Q7Z5L3 287 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 C3orf56Q8N813 242 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 OR2AJ1Q8NGZ0 328 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 OR1F12Q8NHA8 337 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 RASD2Q96D21 266 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 RSRC1Q96IZ7 334 aaKnown RBP10.67□□□□□ -0.7
SNX1-209ENST00000559961 SAMD8Q96LT4 415 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 ZNF582Q96NG8 517 aaPredicted RBP10.67□□□□□ -0.7
SNX1-209ENST00000559961 SYT4Q9H2B2 425 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 NTN4Q9HB63 628 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 TMEM106BQ9NUM4 274 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 IL19Q9UHD0 177 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 COA3Q9Y2R0 106 aaPredicted RBP10.67□□□□□ -0.7
SNX1-209ENST00000559961 IER3IP1Q9Y5U9 82 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 CACNG2Q9Y698 323 aa10.67□□□□□ -0.7
SNX1-209ENST00000559961 MALRD1Q5VYJ5 2156 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 LRRC30A6NM36 301 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 SOCS2O14508 198 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 CDC42EP2O14613 210 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 RGS9O75916 674 aaPredicted RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 UBOX5O94941 541 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 IRF2P14316 349 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 RAC2P15153 192 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 SELEP16581 610 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 SLC6A6P31641 620 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 LCN2P80188 198 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 MESTQ5EB52 335 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 SMARCD3Q6STE5 483 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 VASH1Q7L8A9 365 aaPredicted RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 CPLX4Q7Z7G2 160 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 MUC20Q8N307 709 aaPredicted RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 OR13G1Q8NGZ3 307 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 OR52J3Q8NH60 311 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 SLC7A13Q8TCU3 470 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 HAVCR1Q96D42 359 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 MRI1Q9BV20 369 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 HCAR1Q9BXC0 346 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 G6PC2Q9NQR9 355 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 DDX28Q9NUL7 540 aaKnown RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 ASH2LQ9UBL3 628 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 EGFL7Q9UHF1 273 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 ATPIF1Q9UII2 106 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 KLHL21Q9UJP4 597 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 YLPM1P49750 1951 aaKnown RBP10.66□□□□□ -0.7
SNX1-209ENST00000559961 MXRA5Q9NR99 2828 aa10.66□□□□□ -0.7
SNX1-209ENST00000559961 PTP4A3O75365 173 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 VENTXO95231 258 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 GADD45GO95257 159 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 HLA-DQA2P01906 255 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 CTLA4P16410 223 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 KITLGP21583 273 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 CPT2P23786 658 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 PRDX6P30041 224 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 ECH1Q13011 328 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 MALLQ13021 153 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 ESCO2Q56NI9 601 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 ARMCX4Q5H9R4 360 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 C1orf87Q8N0U7 546 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 FAM216AQ8WUB2 273 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 APOBEC3DQ96AK3 386 aaPredicted RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 ZMYND19Q96E35 227 aaPredicted RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 ERMAPQ96PL5 475 aaPredicted RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 GPA33Q99795 319 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 FAM107BQ9H098 131 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 HDHD2Q9H0R4 259 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 NRIP3Q9NQ35 241 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 DCAF13Q9NV06 445 aaKnown RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 VSX1Q9NZR4 365 aaPredicted RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 NDUFAF4Q9P032 175 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 OR5V1Q9UGF6 321 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 MAGEL2Q9UJ55 1249 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 SIGLEC7Q9Y286 467 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 STARD10Q9Y365 291 aa10.65□□□□□ -0.7
SNX1-209ENST00000559961 NOP16Q9Y3C1 178 aaKnown RBP10.65□□□□□ -0.7
SNX1-209ENST00000559961 FBN3Q75N90 2809 aa10.65□□□□□ -0.71
SNX1-209ENST00000559961 STAB1Q9NY15 2570 aa10.65□□□□□ -0.71
SNX1-209ENST00000559961 PPIAL4EA0A075B759 164 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 PPIAL4CA0A0B4J2A2 164 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 PPIAL4DF5H284 164 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 IMPA2O14732 288 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 OR10H3O60404 316 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 DEAF1O75398 565 aaPredicted RBP10.64□□□□□ -0.71
SNX1-209ENST00000559961 PPIAL4FP0DN26 164 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 MDH2P40926 338 aaKnown RBP10.64□□□□□ -0.71
SNX1-209ENST00000559961 RAD23AP54725 363 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 HILS1P60008 231 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 BTG1P62324 171 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 MXRA7P84157 204 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 SPIBQ01892 262 aa10.64□□□□□ -0.71
SNX1-209ENST00000559961 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms