RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 SLC16A9Q7RTY1 509 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 DPY19L4Q7Z388 723 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 DCXRQ7Z4W1 244 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 OR4F15Q8NGB8 312 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 RHOXF1Q8NHV9 184 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 RFKQ969G6 155 aa18.75■□□□□ 0.59
SNX1-206ENST00000559389 CNN2Q99439 309 aaKnown RBP18.75■□□□□ 0.59
SNX1-206ENST00000559389 DDX28Q9NUL7 540 aaKnown RBP18.75■□□□□ 0.59
SNX1-206ENST00000559389 ENTPD6O75354 484 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 MRPL3P09001 348 aaKnown RBP18.74■□□□□ 0.59
SNX1-206ENST00000559389 NKX6-1P78426 367 aaPredicted RBP18.74■□□□□ 0.59
SNX1-206ENST00000559389 TMED1Q13445 227 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 SETD9Q8NE22 299 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 NUP37Q8NFH4 326 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 OTOSQ8NHW6 89 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 APH1BQ8WW43 257 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 ATF6BQ99941 703 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 YIPF3Q9GZM5 350 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 UBTD1Q9HAC8 227 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 ADGRL4Q9HBW9 690 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 AASSQ9UDR5 926 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 ATP23Q9Y6H3 246 aa18.74■□□□□ 0.59
SNX1-206ENST00000559389 C5orf49A4QMS7 147 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 E7EQL1 145 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 ICMTO60725 284 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 IL5RAQ01344 420 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 SNTB2Q13425 540 aaKnown RBP18.73■□□□□ 0.59
SNX1-206ENST00000559389 EIF2B1Q14232 305 aaKnown RBP18.73■□□□□ 0.59
SNX1-206ENST00000559389 MAD2L1BPQ15013 274 aaPredicted RBP18.73■□□□□ 0.59
SNX1-206ENST00000559389 KRTAP27-1Q3LI81 207 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 TMEM154Q6P9G4 183 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 IZUMO2Q6UXV1 221 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 ZNF454Q8N9F8 522 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 TFAP2CQ92754 450 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 FBXW5Q969U6 566 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 SLAMF6Q96DU3 332 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 ABHD6Q9BV23 337 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.73■□□□□ 0.59
SNX1-206ENST00000559389 KLHDC2Q9Y2U9 406 aa18.73■□□□□ 0.59
SNX1-206ENST00000559389 NR4A1P22736 598 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 WNT5AP41221 380 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 GALK2Q01415 458 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 POU4F2Q12837 409 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 ECH1Q13011 328 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 KRT80Q6KB66 452 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 USP51Q70EK9 711 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 ZNF611Q8N823 705 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 SLC7A6Q92536 515 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 AMELYQ99218 206 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 ZNF442Q9H7R0 627 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 ASH1LQ9NR48 2969 aaKnown RBP18.72■□□□□ 0.59
SNX1-206ENST00000559389 CLN6Q9NWW5 311 aa18.72■□□□□ 0.59
SNX1-206ENST00000559389 CISD1Q9NZ45 108 aaKnown RBP18.72■□□□□ 0.59
SNX1-206ENST00000559389 ZNF878C9JN71 531 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 DBHP09172 617 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 GNAO1P09471 354 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 SBK2P0C263 348 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 CCNOP22674 350 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 PCSK6P29122 969 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 VHLP40337 213 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 ZNF101Q8IZC7 436 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 OR51G2Q8NGK0 314 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 SMAP2Q8WU79 429 aaPredicted RBP18.71■□□□□ 0.59
SNX1-206ENST00000559389 RNF133Q8WVZ7 376 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 DCLRE1CQ96SD1 692 aaKnown RBP18.71■□□□□ 0.59
SNX1-206ENST00000559389 CA10Q9NS85 328 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 SPEF1Q9Y4P9 236 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 HSPE1-MOB4S4R3N1 261 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 CADP27708 2225 aa18.71■□□□□ 0.59
SNX1-206ENST00000559389 SMPD2O60906 423 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 WBP4O75554 376 aaKnown RBP18.7■□□□□ 0.58
SNX1-206ENST00000559389 LYNP07948 512 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 FAM157BP0CG42 384 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 ALOX5APP20292 161 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 OTX1P32242 354 aaPredicted RBP18.7■□□□□ 0.58
SNX1-206ENST00000559389 MTNR1AP48039 350 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 ISL1P61371 349 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 ZNF91Q05481 1191 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 C6orf52Q5T4I8 152 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 ZNF544Q6NX49 715 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 PAMR1Q6UXH9 720 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 C20orf204Q6ZNR8 217 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 RFPL4BQ6ZWI9 263 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 SLC35F2Q8IXU6 374 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 C8orf59Q8N0T1 100 aaPredicted RBP18.7■□□□□ 0.58
SNX1-206ENST00000559389 IPCEF1Q8WWN9 437 aaPredicted RBP18.7■□□□□ 0.58
SNX1-206ENST00000559389 NRGNQ92686 78 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 LURAP1Q96LR2 239 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 Q96MT0 163 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 MNTQ99583 582 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 DHRS9Q9BPW9 319 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 LAMP5Q9UJQ1 280 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 COPS3Q9UNS2 423 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 FBN2P35556 2912 aa18.7■□□□□ 0.58
SNX1-206ENST00000559389 ABCA4P78363 2273 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 UNC79Q9P2D8 2635 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 SNTNA6NMZ2 147 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 GPRIN2O60269 458 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 APOL3O95236 402 aa18.69■□□□□ 0.58
SNX1-206ENST00000559389 ABHD16AO95870 558 aa18.69■□□□□ 0.58
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