RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 LOC100509620A0A075B734 347 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TMEM129A0AVI4 362 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 OR6C68A6NDL8 312 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 F5H5K5 113 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 BHLHE40O14503 412 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 RER1O15258 196 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 GSC2O15499 205 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TLX2O43763 284 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 CD5LO43866 347 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TIMM8AO60220 97 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 ICMTO60725 284 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 FKBP6O75344 327 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CIB2O75838 187 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 LY6HO94772 140 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 MPZL1O95297 269 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 SOX14O95416 240 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 IGHV3-13P01766 116 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 HMGN1P05114 100 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 NAT2P11245 290 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 FCGR1AP12314 374 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ANXA8P13928 327 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ACHEP22303 614 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TNFSF4P23510 183 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 FASP25445 335 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 POU1F1P28069 291 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 FMO3P31513 532 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 NR4A2P43354 598 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 SLC15A1P46059 708 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZNF81P51508 661 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TMEM33P57088 247 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ERVS71-1P61550 626 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 PPP1CBP62140 327 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CCL8P80075 99 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CBX1P83916 185 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.75□□□□□ -1.81
SNX1-205ENST00000559339 LOXL1Q08397 574 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 PPP1R8Q12972 351 aaKnown RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 ECH1Q13011 328 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 MALLQ13021 153 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ENDOGQ14249 297 aaKnown RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 KCNMB1Q16558 191 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TMEM249Q2WGJ8 235 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 HFEQ30201 348 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ALKBH6Q3KRA9 238 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ELFN2Q5R3F8 820 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 SPATA46Q5T0L3 261 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CYB5R2Q6BCY4 276 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZNF770Q6IQ21 691 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 SLC27A4Q6P1M0 643 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CD300LDQ6UXZ3 194 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CCDC121Q6ZUS5 278 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 VASH1Q7L8A9 365 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 PEG10Q86TG7 708 aaKnown RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZBTB46Q86UZ6 589 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 LRP11Q86VZ4 500 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZDHHC13Q8IUH4 622 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 C10orf67Q8IYJ2 551 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZNF101Q8IZC7 436 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ADGRG5Q8IZF4 528 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZCCHC24Q8N2G6 241 aaKnown RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 PAQR4Q8N4S7 273 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 ATG16L2Q8NAA4 619 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 MAPK1IP1LQ8NDC0 245 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 SDR9C7Q8NEX9 313 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 OR6K6Q8NGW6 343 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 OR1F12Q8NHA8 337 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 KLF14Q8TD94 323 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 DNAJC9Q8WXX5 260 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 RDH5Q92781 318 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 PTP4A1Q93096 173 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 APOBEC3DQ96AK3 386 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 OTULINQ96BN8 352 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 SLC7A6OSQ96CW6 309 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 NRBF2Q96F24 287 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 MARS2Q96GW9 593 aaKnown RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 TIMD4Q96H15 378 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 PLEKHA8Q96JA3 519 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 TSSK2Q96PF2 358 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 DCLRE1CQ96SD1 692 aaKnown RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 COQ7Q99807 217 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ATF6BQ99941 703 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 NIPSNAP1Q9BPW8 284 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 PRRG3Q9BZD7 231 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 OR2J1Q9GZK6 312 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 BPESC1Q9GZL8 116 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 EGLN1Q9GZT9 426 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 NKIRAS2Q9NYR9 191 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 PDP1Q9P0J1 537 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 DNAJB9Q9UBS3 223 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 CYB5R1Q9UHQ9 305 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ENOPH1Q9UHY7 261 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 KLHL21Q9UJP4 597 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZDHHC8Q9ULC8 765 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 AKAP9Q99996 3911 aa3.75□□□□□ -1.81
SNX1-205ENST00000559339 SETD2Q9BYW2 2564 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 ZNF469Q96JG9 3925 aaPredicted RBP3.75□□□□□ -1.81
SNX1-205ENST00000559339 RAI1Q7Z5J4 1906 aaPredicted RBP3.74□□□□□ -1.81
SNX1-205ENST00000559339 IGLV1-36A0A0B4J1U3 117 aa3.74□□□□□ -1.81
SNX1-205ENST00000559339 IGHV1-69-2A0A0G2JMI3 117 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms