RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 NCMAPQ5T1S8 102 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 CORO6Q6QEF8 472 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 LINC00346Q8IVM7 164 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 RFLNBQ8N5W9 214 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 OR10H5Q8NGA6 315 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 OR4F15Q8NGB8 312 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 OR51G2Q8NGK0 314 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 OR2T27Q8NH04 317 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 GGHQ92820 318 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 COQ7Q99807 217 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 RHNO1Q9BSD3 238 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 MED18Q9BUE0 208 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 HDHD2Q9H0R4 259 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 C1orf198Q9H425 327 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 AMBNQ9NP70 447 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 KCNN3Q9UGI6 736 aa12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 TEP1Q99973 2627 aaKnown RBP12.85□□□□□ -0.35
SNRPA1-207ENST00000559309 SLC1A7O00341 560 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 SGCEO43556 437 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 XPNPEP2O43895 674 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 ABHD16AO95870 558 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 CELA3BP08861 270 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 CECR9P0C854 216 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 CRHBPP24387 322 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 HOXC12P31275 282 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 OPRL1P41146 370 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 NAA10P41227 235 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 KIR2DL3P43628 341 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 SLC35A2P78381 396 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 ZNF85Q03923 595 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 PIGFQ07326 219 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 RAB39AQ14964 217 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 KLHL22Q53GT1 634 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 ELFN2Q5R3F8 820 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 RNLSQ5VYX0 342 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 ZNF774Q6NX45 483 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 DEGS2Q6QHC5 323 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 DCXRQ7Z4W1 244 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 SLC35F2Q8IXU6 374 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 OR52I1Q8NGK6 324 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 OR6N2Q8NGY6 317 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 SMAP2Q8WU79 429 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 RNF166Q96A37 237 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 MS4A3Q96HJ5 214 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 Q9H521 79 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 CCNB1IP1Q9NPC3 277 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 PAK1IP1Q9NWT1 392 aaPredicted RBP12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 MYRFQ9Y2G1 1151 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 TMEM14AQ9Y6G1 99 aa12.84□□□□□ -0.35
SNRPA1-207ENST00000559309 TMCC2O75069 709 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 RAB36O95755 333 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 LYNP07948 512 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 MRPL3P09001 348 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 SPARCP09486 303 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 LIMS3P0CW19 117 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 LIMS4P0CW20 117 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 CD79AP11912 226 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 PTAFRP25105 342 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 CD40P25942 277 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 DCTDP32321 178 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 HCCSP53701 268 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 NAAAQ02083 359 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 ECH1Q13011 328 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 SP5Q6BEB4 398 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 MEX3BQ6ZN04 569 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 COLCA1Q6ZS62 124 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 PRSS45Q7RTY3 260 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 ZNF485Q8NCK3 441 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 IL17RDQ8NFM7 739 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 OR1F12Q8NHA8 337 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 AKR7LQ8NHP1 331 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 SLAMF6Q96DU3 332 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 CNBD2Q96M20 576 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 OR8B4Q96RC9 309 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 INPP5EQ9NRR6 644 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 DIMT1Q9UNQ2 313 aaKnown RBP12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 PCDHGB1Q9Y5G3 927 aa12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 RAI1Q7Z5J4 1906 aaPredicted RBP12.83□□□□□ -0.36
SNRPA1-207ENST00000559309 RTTNQ86VV8 2226 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 DCHS2Q6V1P9 2916 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 IGHV2OR16-5A0A0B4J2B6 119 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 A0A1W2PQL4 384 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 PHYHO14832 338 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 DOK2O60496 412 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 SRSF10O75494 262 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 PTHP01270 115 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 APEX1P27695 318 aaKnown RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 DCKP27707 260 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 CALCRP30988 508 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 ACTC1P68032 377 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 ACTA1P68133 377 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 NKX6-1P78426 367 aaPredicted RBP12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 MVKQ03426 396 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 HGFACQ04756 655 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 EGR3Q06889 387 aa12.82□□□□□ -0.36
SNRPA1-207ENST00000559309 MED21Q13503 144 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms