RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RAD1O60671 282 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 PEX14O75381 377 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 STK17BO94768 372 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 CELA2AP08217 269 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 CSF1P09603 554 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 TCEA1P23193 301 aaKnown RBP10.05□□□□□ -0.8
CLPX-204ENST00000559152 MPLP40238 635 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 CCR6P51684 374 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 CAMK2DQ13557 499 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 ANGPT1Q15389 498 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 HIST3H3Q16695 136 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 GSG1Q2KHT4 349 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 C6orf15Q6UXA7 325 aaPredicted RBP10.05□□□□□ -0.8
CLPX-204ENST00000559152 LUZP2Q86TE4 346 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 ELMOD2Q8IZ81 293 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 TMEM105Q8N8V8 129 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 ASCC1Q8N9N2 400 aaKnown RBP10.05□□□□□ -0.8
CLPX-204ENST00000559152 PPP1R14AQ96A00 147 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 LOXL4Q96JB6 756 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 HYLS1Q96M11 299 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 PIGQQ9BRB3 760 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 C20orf85Q9H1P6 137 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 SEC61A2Q9H9S3 476 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 EMC7Q9NPA0 242 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 FAM206AQ9NX38 181 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 TAS2R4Q9NYW5 299 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 PTTG3PQ9NZH4 202 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 LOXL2Q9Y4K0 774 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 PCDHGA5Q9Y5G8 931 aa10.05□□□□□ -0.8
CLPX-204ENST00000559152 CUL9Q8IWT3 2517 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 H0YC42 278 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 H3BSH0 61 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 H7C417 338 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 WNT11O96014 354 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 CCL3P10147 92 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 HSD11B1P28845 292 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 GABREP78334 506 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 H3F3AP84243 136 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 C19orf57Q0VDD7 668 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 CHAF1BQ13112 559 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 TNK1Q13470 666 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 SSPNQ14714 243 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 POU4F3Q15319 338 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 SF3B4Q15427 424 aaKnown RBP eCLIP10.04□□□□□ -0.83e-6■■■■■ 30.2
CLPX-204ENST00000559152 TAF13Q15543 124 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 RAET1LQ5VY80 246 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 MTFR2Q6P444 385 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 WDFY1Q8IWB7 410 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 ZFAND1Q8TCF1 268 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 TAAR9Q96RI9 348 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 KLK11Q9UBX7 282 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 MTFP1Q9UDX5 166 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 GDF2Q9UK05 429 aaPredicted RBP10.04□□□□□ -0.8
CLPX-204ENST00000559152 PCNX3Q9H6A9 2034 aa10.04□□□□□ -0.8
CLPX-204ENST00000559152 TEX51A0A1B0GUA7 166 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 LOC390937A0A1W2PQ73 354 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 SULT1C2O00338 296 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 SYT7O43581 403 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 DNPH1O43598 174 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 TGM6O95932 706 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 HPP00738 406 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 OPN1LWP04000 364 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 QDPRP09417 244 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 PSMA6P60900 246 aaKnown RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 GLYATL3Q5SZD4 288 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 STPG1Q5TH74 334 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 CORO6Q6QEF8 472 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 PLPP7Q8NBV4 271 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 SLC25A28Q96A46 364 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 INTS12Q96CB8 462 aaKnown RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 SORCS2Q96PQ0 1159 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 DDA1Q9BW61 102 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 GON7Q9BXV9 100 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 PBOV1Q9GZY1 135 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 RANBP3Q9H6Z4 567 aaPredicted RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 TCFL5Q9UL49 500 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 A0A1B0GVI7 797 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 M0R296 226 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 EIF1AYO14602 144 aaKnown RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 P04436 131 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 ERCC1P07992 297 aaPredicted RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 ANXA3P12429 323 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 GABRA1P14867 456 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 TCN2P20062 427 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 PRSS3P35030 304 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 LSM6P62312 80 aaKnown RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 RPS15P62841 145 aaKnown RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 RAC1P63000 192 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 FCN2Q15485 313 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 C1orf100Q5SVJ3 147 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 METTL11BQ5VVY1 283 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 SFRP4Q6FHJ7 346 aaPredicted RBP10.03□□□□□ -0.8
CLPX-204ENST00000559152 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 ADGRE4PQ86SQ3 457 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 OR5D14Q8NGL3 314 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 GRPEL2Q8TAA5 225 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 GIMAP1Q8WWP7 306 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 PNPLA2Q96AD5 504 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 MED30Q96HR3 178 aa10.03□□□□□ -0.8
CLPX-204ENST00000559152 GNRHR2Q96P88 292 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms