RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 ADAM8P78325 824 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 SCRN3Q0VDG4 424 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 RAB35Q15286 201 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 EFNB3Q15768 340 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 SNAPC1Q16533 368 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 TEX30Q5JUR7 227 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 OGFRL1Q5TC84 451 aaPredicted RBP9.83□□□□□ -0.84
SNX1-204ENST00000559061 ZNF544Q6NX49 715 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 VHLLQ6RSH7 139 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 CXXC5Q7LFL8 322 aaKnown RBP9.83□□□□□ -0.84
SNX1-204ENST00000559061 MUC15Q8N387 334 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 IL17RDQ8NFM7 739 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 OR4F15Q8NGB8 312 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 OR6K6Q8NGW6 343 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 OR1F12Q8NHA8 337 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 TMEM163Q8TC26 289 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 GTF3AQ92664 365 aaKnown RBP9.83□□□□□ -0.84
SNX1-204ENST00000559061 STMN2Q93045 179 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 HRASLS5Q96KN8 279 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 IL4I1Q96RQ9 567 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 C9orf16Q9BUW7 83 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 MRPL37Q9BZE1 423 aaKnown RBP9.83□□□□□ -0.84
SNX1-204ENST00000559061 OR51V1Q9H2C8 321 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 DDX28Q9NUL7 540 aaKnown RBP9.83□□□□□ -0.84
SNX1-204ENST00000559061 POU2F3Q9UKI9 436 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 NDRG4Q9ULP0 352 aaKnown RBP9.83□□□□□ -0.84
SNX1-204ENST00000559061 FZR1Q9UM11 496 aa9.83□□□□□ -0.84
SNX1-204ENST00000559061 IQCMA0A1B0GVH7 501 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 ZNF593O00488 134 aaPredicted RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 PRODHO43272 600 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 TLX2O43763 284 aaPredicted RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 CLPTM1O96005 669 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 HLA-DQA2P01906 255 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 PCSK6P29122 969 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 APOBEC3AP31941 199 aaPredicted RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 OTX1P32242 354 aaPredicted RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 GLRXP35754 106 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 MPV17P39210 176 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 PTH2RP49190 550 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 FABP6P51161 128 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 HCCSP53701 268 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 APOFQ13790 326 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 KEAP1Q14145 624 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 GGTLC2Q14390 218 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 LRRC36Q1X8D7 754 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 TBC1D28Q2M2D7 210 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 ELFN2Q5R3F8 820 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 ZBTB49Q6ZSB9 765 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 NAA40Q86UY6 237 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 C10orf67Q8IYJ2 551 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 MRPL24Q96A35 216 aaKnown RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 MARS2Q96GW9 593 aaKnown RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 DOK1Q99704 481 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 COQ7Q99807 217 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 FOXC2Q99958 501 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 KCNN2Q9H2S1 579 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 C1orf198Q9H425 327 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 PLK3Q9H4B4 646 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 CBLN4Q9NTU7 201 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 BEX4Q9NWD9 120 aaPredicted RBP9.82□□□□□ -0.84
SNX1-204ENST00000559061 PLEK2Q9NYT0 353 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 ATPIF1Q9UII2 106 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 COPS3Q9UNS2 423 aa9.82□□□□□ -0.84
SNX1-204ENST00000559061 ARID1AO14497 2285 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 IGLV3-9A0A075B6K5 115 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 IGHV4-39P01824 125 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 SPARCP09486 303 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 ACSM4P0C7M7 580 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 ZNF250P15622 560 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 CCNOP22674 350 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 DNASE1P24855 282 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 FMO3P31513 532 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 APLNRP35414 380 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 SERPINF1P36955 418 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 NAA10P41227 235 aaPredicted RBP9.81□□□□□ -0.84
SNX1-204ENST00000559061 GDI2P50395 445 aaKnown RBP9.81□□□□□ -0.84
SNX1-204ENST00000559061 UCP2P55851 309 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 PLP2Q04941 152 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 TRIP10Q15642 601 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 ALKBH6Q3KRA9 238 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 KLHL12Q53G59 568 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 SLC35D3Q5M8T2 416 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 SPATA46Q5T0L3 261 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 TMEM154Q6P9G4 183 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 COLCA1Q6ZS62 124 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 PRSS45Q7RTY3 260 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 DPY19L4Q7Z388 723 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 DCXRQ7Z4W1 244 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 ERI1Q8IV48 349 aaKnown RBP9.81□□□□□ -0.84
SNX1-204ENST00000559061 ZCCHC24Q8N2G6 241 aaKnown RBP9.81□□□□□ -0.84
SNX1-204ENST00000559061 GJC3Q8NFK1 279 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 APH1BQ8WW43 257 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 EME1Q96AY2 570 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 OTULINQ96BN8 352 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 INTS14Q96SY0 518 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 TEAD3Q99594 435 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 KCNS3Q9BQ31 491 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 SYT3Q9BQG1 590 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 CACNG6Q9BXT2 260 aa9.81□□□□□ -0.84
SNX1-204ENST00000559061 GSX2Q9BZM3 304 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms