RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-207ENST00000558763 TMEM178AQ8NBL3 297 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 OR5H6Q8NGV6 325 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 OR10D3Q8NH80 312 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 OR2V1Q8NHB1 315 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 NAA11Q9BSU3 229 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-207ENST00000558763 SF3B5Q9BWJ5 86 aaKnown RBP11.45□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF71Q9NQZ8 489 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-207ENST00000558763 GLTPQ9NZD2 209 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 TRAV17A0A0B4J275 112 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 A0A1W2PPL8 197 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 FABP12A6NFH5 140 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 CXCL13O43927 109 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 CSF3P09919 207 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 IL7P13232 177 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 SOX2P48431 317 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 LHX2P50458 406 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 PMP22Q01453 160 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 MADCAM1Q13477 382 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 ODF4Q2M2E3 257 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 TRIM16LQ309B1 348 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 LINC00303Q3SY05 128 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 MZT2AQ6P582 158 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 STAC2Q6ZMT1 411 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 LRRTM1Q86UE6 522 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 UBQLNLQ8IYU4 475 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF676Q8N7Q3 588 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 PRORYQ9H606 182 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 PNRC2Q9NPJ4 139 aaKnown RBP11.45□□□□□ -0.58
SMAD3-207ENST00000558763 TIGARQ9NQ88 270 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 CYSLTR2Q9NS75 346 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 FLVCR1Q9Y5Y0 555 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 R4GMQ9 66 aa11.45□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF726A6NNF4 738 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 KLRC4-KLRK1H3BQV0 150 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 POU3F2P20265 443 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-207ENST00000558763 ANOS1P23352 680 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 MAGEA5P43359 124 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 CARD18P57730 90 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 PLGLB1Q02325 96 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 HYAL4Q2M3T9 481 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 METAP1DQ6UB28 335 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-207ENST00000558763 TMEM251Q8N6I4 163 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 RBMXL3Q8N7X1 1067 aaKnown RBP11.44□□□□□ -0.58
SMAD3-207ENST00000558763 MINDY2Q8NBR6 621 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 TRMT10AQ8TBZ6 339 aaKnown RBP11.44□□□□□ -0.58
SMAD3-207ENST00000558763 GPR148Q8TDV2 347 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 TMEM106AQ96A25 262 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 NABP1Q96AH0 204 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 SLAMF6Q96DU3 332 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF845Q96IR2 970 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-207ENST00000558763 CNTNAP3BQ96NU0 1288 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 CNTNAP3Q9BZ76 1288 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 COMMD4Q9H0A8 199 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 FAM206AQ9NX38 181 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 LUZP4Q9P127 313 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 GDF2Q9UK05 429 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-207ENST00000558763 FREM1Q5H8C1 2179 aa11.44□□□□□ -0.58
SMAD3-207ENST00000558763 A0A1W2PQ09 198 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 FAM166BA8MTA8 275 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 NPIPA2E9PIF3 369 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 NPIPA3F8WFD2 350 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 H3BSH0 61 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SSX4O60224 188 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SLC19A2O60779 497 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SPNP16150 400 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 MAPK3P27361 379 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 CSNK1A1P48729 337 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 CLDN18P56856 261 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF169Q14929 603 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 LRRC28Q86X40 367 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SAMD12Q8N8I0 201 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 GDPD1Q8N9F7 314 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 OR10H5Q8NGA6 315 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 ROBO4Q8WZ75 1007 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 MALT1Q9UDY8 824 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 EMC9Q9Y3B6 208 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 AIPO00170 330 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 PTTG1O95997 202 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 HLA-DQB1P01920 261 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 RAF1P04049 648 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SNRPBP14678 240 aaKnown RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 NPR2P20594 1047 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 PTBP1P26599 531 aaKnown RBP eCLIP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 EIF1AXP47813 144 aaKnown RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 MMP16P51512 607 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 C20orf196Q8IYI0 205 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 POC5Q8NA72 575 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 ZFP62Q8NB50 900 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 ZNF837Q96EG3 531 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SLC6A15Q9H2J7 730 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 C1orf198Q9H425 327 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SP140LQ9H930 580 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 SEC61A2Q9H9S3 476 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 TBCCD1Q9NVR7 557 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 ASH2LQ9UBL3 628 aa11.43□□□□□ -0.58
SMAD3-207ENST00000558763 LINC01387J3KSC0 135 aa11.42□□□□□ -0.58
SMAD3-207ENST00000558763 SLC43A1O75387 559 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms