RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 SLC3A1Q07837 685 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ODF1Q14990 250 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 SPATA46Q5T0L3 261 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 MBNL2Q5VZF2 373 aaKnown RBP6.86□□□□□ -1.31
TRAF3-205ENST00000558700 RFPL4BQ6ZWI9 263 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 VTCN1Q7Z7D3 282 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF101Q8IZC7 436 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 RNF113BQ8IZP6 322 aaKnown RBP6.86□□□□□ -1.31
TRAF3-205ENST00000558700 FAM156AQ8NDB6 213 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 OR13C2Q8NGS9 318 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 AKR7LQ8NHP1 331 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ABHD4Q8TB40 342 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 RAB1CQ92928 201 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF570Q96NI8 536 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 LRRC37BQ96QE4 947 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 DIRC2Q96SL1 478 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ARPC5LQ9BPX5 153 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 HOPXQ9BPY8 73 aaPredicted RBP6.86□□□□□ -1.31
TRAF3-205ENST00000558700 WACQ9BTA9 647 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 EGLN1Q9GZT9 426 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 WNT5BQ9H1J7 359 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 CDIP1Q9H305 208 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ANKRD19PQ9H560 264 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 C7orf69Q9H7B7 122 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 METTL17Q9H7H0 456 aaPredicted RBP6.86□□□□□ -1.31
TRAF3-205ENST00000558700 KRCC1Q9NPI7 259 aaPredicted RBP6.86□□□□□ -1.31
TRAF3-205ENST00000558700 MAN2C1Q9NTJ4 1040 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 CMTM6Q9NX76 183 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 ARMCX1Q9P291 453 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 WIPI2Q9Y4P8 454 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 TIMM10BQ9Y5J6 103 aa6.86□□□□□ -1.31
TRAF3-205ENST00000558700 LOC100509620A0A075B734 347 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 A0A0G2JMP0 313 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 A0A0X1KG70 313 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ZSCAN5BA6NJL1 495 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 C22orf46C9J442 243 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 NME4O00746 187 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 WNT9BO14905 357 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 AHCYL1O43865 530 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 DOK2O60496 412 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MPZL1O95297 269 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ABHD16AO95870 558 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 SERPINA1P01009 418 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 IGHV2-5P01817 119 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 AMY2AP04746 511 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 CD14P08571 375 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 COX5BP10606 129 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 AMY2BP19961 511 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MAKP20794 623 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 GSTM3P21266 225 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MPV17P39210 176 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 YAP1P46937 504 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 GSK3BP49841 420 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 NUDT2P50583 147 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 LMO4P61968 165 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 SRSF2Q01130 221 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 SCRN3Q0VDG4 424 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 KRR1Q13601 381 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ENDOGQ14249 297 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 TSTQ16762 297 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 C4orf46Q504U0 113 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MESTQ5EB52 335 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 AVPI1Q5T686 147 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ACSM5Q6NUN0 579 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF774Q6NX45 483 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 HACD2Q6Y1H2 254 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MBOAT2Q6ZWT7 520 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 CBLL1Q75N03 491 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 RRM2BQ7LG56 351 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MEX3DQ86XN8 651 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 SLC15A3Q8IY34 581 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 LRRC75AQ8NAA5 344 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 OR4M2Q8NGB6 313 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 OR51A7Q8NH64 312 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 SLC25A40Q8TBP6 338 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 KLF14Q8TD94 323 aaPredicted RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ZNF418Q8TF45 676 aaPredicted RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ZFAND2BQ8WV99 257 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 GTF3AQ92664 365 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 FAM162AQ96A26 154 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MARS2Q96GW9 593 aaKnown RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 GAL3ST1Q99999 423 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 KCTD14Q9BQ13 255 aaPredicted RBP6.85□□□□□ -1.31
TRAF3-205ENST00000558700 OR2J1Q9GZK6 312 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 MED4Q9NPJ6 270 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 POLE4Q9NR33 117 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ERVK13-1Q9NX77 482 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 RHCGQ9UBD6 479 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 GRHPRQ9UBQ7 328 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 RPS6KA6Q9UK32 745 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 ENPP4Q9Y6X5 453 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 CUBNO60494 3623 aa6.85□□□□□ -1.31
TRAF3-205ENST00000558700 A0A087WUU8 490 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 TEX13CA0A0J9YWL9 993 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 ISPDA4D126 451 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 PRSS37A4D1T9 235 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 H7C1C5 153 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 J3KTA2 159 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 J3QLI3 93 aa6.84□□□□□ -1.31
TRAF3-205ENST00000558700 CDC42EP2O14613 210 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms