RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 PTP4A1Q93096 173 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 KISS1RQ969F8 398 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-230ENST00000557427 S100PBPQ96BU1 408 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 MSI2Q96DH6 328 aaKnown RBP10.91□□□□□ -0.66
SHMT2-230ENST00000557427 ZMYND19Q96E35 227 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-230ENST00000557427 HDHD5Q9BXW7 423 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 BCO1Q9HAY6 547 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 GP6Q9HCN6 339 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 SSR3Q9UNL2 185 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 CAB39Q9Y376 341 aaPredicted RBP10.91□□□□□ -0.66
SHMT2-230ENST00000557427 SF3B6Q9Y3B4 125 aaKnown RBP10.91□□□□□ -0.66
SHMT2-230ENST00000557427 HDGFL3Q9Y3E1 203 aa10.91□□□□□ -0.66
SHMT2-230ENST00000557427 ZNF724A8MTY0 619 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 IMPA2O14732 288 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 AKAP8O43823 692 aaKnown RBP10.9□□□□□ -0.66
SHMT2-230ENST00000557427 RAMP1O60894 148 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 APOL3O95236 402 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 PMS2P2O95744 297 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 IGHV3-9P01782 118 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 CD3EP07766 207 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 GAAP10253 952 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 IMPDH2P12268 514 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 APEHP13798 732 aaKnown RBP10.9□□□□□ -0.66
SHMT2-230ENST00000557427 SLC25A16P16260 332 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 IL32P24001 234 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 NOS3P29474 1203 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 SOX6P35712 828 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 ATP6V1E1P36543 226 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 CAPZA2P47755 286 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 OR3A2P47893 321 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 COMPP49747 757 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-230ENST00000557427 SLC35A1P78382 337 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 POU4F2Q12837 409 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 CRMP1Q14194 572 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 ZNF74Q16587 644 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 SFRP5Q5T4F7 317 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 LIPKQ5VXJ0 399 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 FAM166AQ6J272 317 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 SEZ6L2Q6UXD5 910 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 TMPRSS11AQ6ZMR5 421 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 SHFQ7M4L6 423 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 ZBTB46Q86UZ6 589 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 GABRG1Q8N1C3 465 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 UBE2J2Q8N2K1 259 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 MFSD4AQ8N468 514 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 STEAP2Q8NFT2 490 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 OR51G2Q8NGK0 314 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 C10orf105Q8TEF2 133 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 ERMAPQ96PL5 475 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-230ENST00000557427 TEAD3Q99594 435 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 NAA11Q9BSU3 229 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-230ENST00000557427 CDADC1Q9BWV3 514 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 ASPNQ9BXN1 380 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 NDEL1Q9GZM8 345 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 OCEL1Q9H607 264 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 RNF167Q9H6Y7 350 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 MED20Q9H944 212 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 TRAPPC4Q9Y296 219 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 HIF3AQ9Y2N7 669 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 NOSIPQ9Y314 301 aaKnown RBP10.9□□□□□ -0.66
SHMT2-230ENST00000557427 CORINQ9Y5Q5 1042 aa10.9□□□□□ -0.66
SHMT2-230ENST00000557427 A0A075B6Q4 140 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 LOC100289279A0A1B0GTE1 492 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 DPRXA6NFQ7 191 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 MCIDASD6RGH6 385 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF208O43345 1280 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 LYZL6O75951 148 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 VENTXO95231 258 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 BMP4P12644 408 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF12P17014 697 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
SHMT2-230ENST00000557427 USF1P22415 310 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-230ENST00000557427 GABRA5P31644 462 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 NTF4P34130 210 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 DSCR9P59020 149 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 ACTC1P68032 377 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 ACTA1P68133 377 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 GPR50Q13585 617 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 OR7A5Q15622 319 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 LCN1P1Q5VSP4 162 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 C16orf87Q6PH81 154 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 CD200R1LQ6Q8B3 271 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF322Q6U7Q0 402 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-230ENST00000557427 BHLHA15Q7RTS1 189 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-230ENST00000557427 LHFPL3Q86UP9 236 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 IGFN1Q86VF2 1251 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 LRRC17Q8N6Y2 441 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 LRRC75AQ8NAA5 344 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 FNDC8Q8TC99 324 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 GATAD2BQ8WXI9 593 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 COQ7Q99807 217 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 HCAR1Q9BXC0 346 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 OR10A4Q9H209 315 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 EXOSC4Q9NPD3 245 aaKnown RBP10.89□□□□□ -0.67
SHMT2-230ENST00000557427 NRIP3Q9NQ35 241 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 EMC3Q9P0I2 261 aa10.89□□□□□ -0.67
SHMT2-230ENST00000557427 PEX16Q9Y5Y5 336 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms