RNA–Protein interactions for RNA: ENST00000557341.5

SNX6-210, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 559 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-210ENST00000557341 KITLGP21583 273 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 RPS6KA3P51812 740 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 LSM6P62312 80 aaKnown RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 CDK5R2Q13319 367 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 KRT72Q14CN4 511 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 GLYATQ6IB77 296 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 C1orf229Q6ZS94 237 aaPredicted RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 ZNF771Q7L3S4 317 aaPredicted RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 C1QL2Q7Z5L3 287 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 ST7LQ8TDW4 575 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 POFUT1Q9H488 388 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 DCAF13Q9NV06 445 aaKnown RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 ADA2Q9NZK5 511 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 VSX1Q9NZR4 365 aaPredicted RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 IL20RAQ9UHF4 553 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 COA3Q9Y2R0 106 aaPredicted RBP11.99□□□□□ -0.49
SNX6-210ENST00000557341 POLR1DQ9Y2S0 133 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 NPTNQ9Y639 398 aa11.99□□□□□ -0.49
SNX6-210ENST00000557341 TRBV4-1A0A0J9YWV2 114 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 OR6C6A6NF89 314 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 J3QW42 95 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 PTP4A3O75365 173 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 RGS9O75916 674 aaPredicted RBP11.98□□□□□ -0.49
SNX6-210ENST00000557341 AVPP01185 164 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 PRDX6P30041 224 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 FXYD6P3P58550 94 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 SPRNQ5BIV9 151 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 PGM2L1Q6PCE3 622 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 DNM1P34Q6PK57 102 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 SMARCD3Q6STE5 483 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 DPY19L2P2Q6ZN68 376 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 PTCHD4Q6ZW05 846 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 USP43Q70EL4 1123 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 FAM86B1Q8N7N1 296 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 OR2Z1Q8NG97 314 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 FANK1Q8TC84 345 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 C7orf34Q96L11 122 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 DHRS1Q96LJ7 313 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 ELAC2Q9BQ52 826 aaKnown RBP11.98□□□□□ -0.49
SNX6-210ENST00000557341 NUAK2Q9H093 628 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 MYLK2Q9H1R3 596 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 TMEM106BQ9NUM4 274 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 PCDHB10Q9UN67 800 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 IER3IP1Q9Y5U9 82 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 V9GYQ6 96 aa11.98□□□□□ -0.49
SNX6-210ENST00000557341 UNC119BA6NIH7 251 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 IMPA2O14732 288 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 SURF4O15260 269 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 FOXH1O75593 365 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 DIRAS1O95057 198 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 TXNDC12O95881 172 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 IGHV2-70P01814 119 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 CRABP1P29762 137 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 RGS6P49758 472 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 HILS1P60008 231 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 ACTG1P63261 375 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 LCN2P80188 198 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 SEC23BQ15437 767 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 OTPQ5XKR4 325 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 C1orf94Q6P1W5 598 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 C12orf54Q6X4T0 127 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 Q6ZR03 302 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 SPICQ8N5J4 248 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 RNF148Q8N7C7 305 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 ZNF283Q8N7M2 679 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 OR52J3Q8NH60 311 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 NANPQ8TBE9 248 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 SLC7A6Q92536 515 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 CMBLQ96DG6 245 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 SAMD8Q96LT4 415 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 JMJD8Q96S16 334 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 DCLRE1CQ96SD1 692 aaKnown RBP11.97□□□□□ -0.49
SNX6-210ENST00000557341 NSRP1Q9H0G5 558 aaKnown RBP11.97□□□□□ -0.49
SNX6-210ENST00000557341 HDHD2Q9H0R4 259 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 DCAF16Q9NXF7 216 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 MAGEL2Q9UJ55 1249 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 STARD10Q9Y365 291 aa11.97□□□□□ -0.49
SNX6-210ENST00000557341 TRIM77I1YAP6 450 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 RER1O15258 196 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 GADD45GO95257 159 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 PPP1R3DO95685 299 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 RAC2P15153 192 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 ADRA2CP18825 462 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 CDKN2AP42771 156 aaKnown RBP11.96□□□□□ -0.49
SNX6-210ENST00000557341 SMIM11AP58511 58 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 BTG1P62324 171 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 SPIBQ01892 262 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 KCNMB1Q16558 191 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 TMEM155Q4W5P6 130 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 CCDC92Q53HC0 331 aaPredicted RBP11.96□□□□□ -0.49
SNX6-210ENST00000557341 JAZF1Q86VZ6 243 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 KLHL36Q8N4N3 616 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 OR5L1Q8NGL2 311 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 ITLN1Q8WWA0 313 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 PTP4A1Q93096 173 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 HAVCR1Q96D42 359 aa11.96□□□□□ -0.49
SNX6-210ENST00000557341 ERMAPQ96PL5 475 aaPredicted RBP11.96□□□□□ -0.49
SNX6-210ENST00000557341 FUZQ9BT04 418 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms