RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 RTP3Q9BQQ7 232 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 WDR83Q9BRX9 315 aaKnown RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 C20orf24Q9BUV8 137 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF354AO60765 605 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR5G3P0C626 314 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR1Q1Q15612 314 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 GGNBP1Q5YKI7 109 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 RANBP10Q6VN20 620 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR4F17Q8NGA8 305 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR51S1Q8NGJ8 323 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 GHSRQ92847 366 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PLAGL1Q9UM63 463 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 SHPRHQ149N8 1683 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PKIAP61925 76 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 LRRC26Q2I0M4 334 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF761Q86XN6 746 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF738Q8NE65 137 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ADAT1Q9BUB4 502 aaKnown RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF391Q9UJN7 358 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 FAM74A7A6NL05 159 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 LMO2P25791 158 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 MS4A2Q01362 244 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CEACAM7Q14002 265 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CD99L2Q8TCZ2 262 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 TXLNGYQ9BZA5 131 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CLDN34H7C241 214 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PGA3P0DJD8 388 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 HTR1DP28221 377 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 SLC5A2P31639 672 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 IL10RAQ13651 578 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF66Q6ZN08 573 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR51F2Q8NH61 342 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ATXN7L1Q9ULK2 861 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 COL1A1P02452 1464 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR52A4PA6NMU1 304 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 BCL2L11O43521 198 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PNLIPRP3Q17RR3 467 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 GGTA1PQ4G0N0 100 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZBTB37Q5TC79 503 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 OR6S1Q8NH40 331 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 A0A1W2PN81 502 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 SERPINE3A8MV23 424 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 NME2P1O60361 137 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CTSAP10619 480 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CHRNA7P36544 502 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PCBP4P57723 403 aaKnown RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PIP5KL1Q5T9C9 394 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 TXNDC8Q6A555 127 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CPMP14384 443 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 NNATQ16517 81 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CMTM8Q8IZV2 173 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 DTX3Q8N9I9 347 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 PERPQ96FX8 193 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF778Q96MU6 729 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 TEAD3Q99594 435 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF552Q9H707 407 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 UBR2Q8IWV8 1755 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 I6L893 689 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 NPY1RP25929 384 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 CDC20Q12834 499 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 MANEAQ5SRI9 462 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 COL5A1-AS1Q5SY13 56 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 TRAT1Q6PIZ9 186 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 FIGLAQ6QHK4 219 aa8.13□□□□□ -1.11
SYNE3-205ENST00000557275 TMEM182Q6ZP80 229 aaPredicted RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 FUBP1Q96AE4 644 aaKnown RBP8.13□□□□□ -1.11
SYNE3-205ENST00000557275 GDF6Q6KF10 455 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 DPPA4Q7L190 304 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SLC30A3Q99726 388 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 A0A087X0M5 115 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 A0A1B0GX30 115 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 GPR25O00155 361 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 RAB27BO00194 218 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 DUS4LO95620 317 aaKnown RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 GDF1P27539 372 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ARR3P36575 388 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 METAP1P53582 386 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 C17orf78Q8N4C9 275 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 POMT2Q9UKY4 750 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 MED16Q9Y2X0 877 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 RBP2P50120 134 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 F2RL3Q96RI0 385 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 CLMPQ9H6B4 373 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ANXA10Q9UJ72 324 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF593O00488 134 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ISLRO14498 428 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 TOMM34Q15785 309 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 AMIGO3Q86WK7 504 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 FOXJ3Q9UPW0 622 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 GGT5P36269 586 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 ZNF551Q7Z340 670 aaPredicted RBP8.12□□□□□ -1.11
SYNE3-205ENST00000557275 FBXL18Q96ME1 805 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 FOXO6A8MYZ6 492 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 PRAMEF26H0Y7S4 382 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 HRASP01112 189 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 OR4Q2P0C623 313 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 FABP4P15090 132 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SYPL2Q5VXT5 272 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 SLCO1B1Q9Y6L6 691 aa8.12□□□□□ -1.11
SYNE3-205ENST00000557275 TDRD15B5MCY1 1934 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms