RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	SLC22A24	Q8N4F4	322 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	C11orf44	Q8N8P7	122 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR5D16	Q8NGK9	328 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR1J1	Q8NGS3	322 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR5R1	Q8NH85	324 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	KLF14	Q8TD94	323 aa	Predicted RBP	3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	XAGE5	Q8WWM1	108 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	GEMIN6	Q8WXD5	167 aa	Known RBP	3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	C3orf30	Q96M34	536 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	MAGEB18	Q96M61	343 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	TSSK3	Q96PN8	268 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	KCNA7	Q96RP8	456 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	PCGF1	Q9BSM1	259 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	C1orf43	Q9BWL3	253 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	TRIM31	Q9BZY9	425 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	CDH20	Q9HBT6	801 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	B3GAT2	Q9NPZ5	323 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	PNPO	Q9NVS9	261 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	GAR1	Q9NY12	217 aa	Known RBP	3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	ETAA1	Q9NY74	926 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	IL19	Q9UHD0	177 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	PPP1R3C	Q9UQK1	317 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	TMED5	Q9Y3A6	229 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	FAM96B	Q9Y3D0	163 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	WDR45	Q9Y484	360 aa		3.85	□□□□□ -1.79
SCFD1-223	ENST00000557076	IQCM	A0A1B0GVH7	501 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ANKRD61	A6NGH8	418 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZSCAN5B	A6NJL1	495 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076		H3BSA7	217 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	SLC28A1	O00337	649 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	AP3D1	O14617	1153 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	PHYH	O14832	338 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	SURF4	O15260	269 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	SLC16A6	O15403	523 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	C6orf47	O95873	294 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	THRB	P10828	461 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	CCL2	P13500	99 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	RPS2	P15880	293 aa	Known RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	TUBG1	P23258	451 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ATP5F1	P24539	256 aa	Predicted RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	PITPNB	P48739	271 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	NPY4R	P50391	375 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	COPZ1	P61923	177 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	GLO1	Q04760	184 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	BNIP2	Q12982	314 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	GNA13	Q14344	377 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	CHI3L2	Q15782	390 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	DMRTC1	Q5HYR2	192 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	TMEM255A	Q5JRV8	349 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	KHDC1L	Q5JSQ8	128 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ATAD3B	Q5T9A4	648 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	WDR25	Q64LD2	544 aa	Predicted RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	TMEM53	Q6P2H8	277 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZNF841	Q6ZN19	808 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	OLIG3	Q7RTU3	272 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZER1	Q7Z7L7	766 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	KRT73	Q86Y46	540 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	KLHL7	Q8IXQ5	586 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	KLHDC1	Q8N7A1	406 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR7A2P	Q8NGA2	310 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR2T6	Q8NHC8	308 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	VANGL1	Q8TAA9	524 aa	Predicted RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	FBXO25	Q8TCJ0	367 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	PNPT1	Q8TCS8	783 aa	Known RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	WIPF2	Q8TF74	440 aa	Predicted RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ROPN1L	Q96C74	230 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	SLC25A36	Q96CQ1	311 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	L3HYPDH	Q96EM0	354 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	TXNDC15	Q96J42	360 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	WDFY2	Q96P53	400 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	TMEM237	Q96Q45	408 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ARHGDIG	Q99819	225 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	RHOXF2	Q9BQY4	288 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	PTDSS2	Q9BVG9	487 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	QTRT1	Q9BXR0	403 aa	Known RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	PRSS22	Q9GZN4	317 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	OR51B6	Q9H340	312 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	RNF121	Q9H920	327 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	MID1IP1	Q9NPA3	183 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	TUBG2	Q9NRH3	451 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	MAN2C1	Q9NTJ4	1040 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ATAD3A	Q9NVI7	634 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	EIF3K	Q9UBQ5	218 aa	Known RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	CLN8	Q9UBY8	286 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	ZMAT5	Q9UDW3	170 aa	Known RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	SIGLEC9	Q9Y336	463 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	CAB39	Q9Y376	341 aa	Predicted RBP	3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076	SNX13	Q9Y5W8	968 aa		3.84	□□□□□ -1.79
SCFD1-223	ENST00000557076		A0A1W2PPL8	197 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	ZNF726	A6NNF4	738 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	ZNF785	A8K8V0	405 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	F2RL2	O00254	374 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	AIM2	O14862	343 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	CFLAR	O15519	480 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	LYPLA1	O75608	230 aa	Predicted RBP	3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	FARS2	O95363	451 aa	Known RBP	3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	AHSA1	O95433	338 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	FBP1	P09467	338 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	CD28	P10747	220 aa		3.83	□□□□□ -1.8
SCFD1-223	ENST00000557076	RPS4Y1	P22090	263 aa	Known RBP	3.83	□□□□□ -1.8

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