RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 QDPRP09417 244 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 BTCP35070 178 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 EPHA4P54764 986 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 RAP1BP61224 184 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 RAP1AP62834 184 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 SORDQ00796 357 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 KLF9Q13886 244 aaPredicted RBP13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 LCN10Q6JVE6 187 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 NLRC3Q7RTR2 1065 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ANGPTL5Q86XS5 388 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 WDR89Q96FK6 387 aaPredicted RBP13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 DUSP23Q9BVJ7 150 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 C1QTNF6Q9BXI9 259 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 CHST6Q9GZX3 395 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 PCDHGA5Q9Y5G8 931 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 IGLV3-19P01714 112 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 IGHG1P01857 330 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 PGAM2P15259 253 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 PI3P19957 117 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 SNU13P55769 128 aaKnown RBP13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 PMPCAQ10713 525 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 OGFOD3Q6PK18 319 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF704Q6ZNC4 412 aaPredicted RBP13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 YRDCQ86U90 279 aaKnown RBP13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 GVQW1Q8N7I0 195 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ST6GALNAC5Q9BVH7 336 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 GHITMQ9H3K2 345 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF160Q9HCG1 818 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 EXOSC3Q9NQT5 275 aaKnown RBP13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 PLEK2Q9NYT0 353 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 SCP2D1Q9UJQ7 156 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 CTAG2O75638 210 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 SC5DO75845 299 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 TMEM81Q6P7N7 255 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 RHOUQ7L0Q8 258 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ARHGEF39Q8N4T4 335 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF680Q8NEM1 530 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 PHYHIPQ92561 330 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 CA10Q9NS85 328 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ALKBH4Q9NXW9 302 aa13.73□□□□□ -0.21
TMEM55B-207ENST00000557041 ZSCAN5BA6NJL1 495 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 KLK2P20151 261 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 MFAP5Q13361 173 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 TMEM244Q5VVB8 128 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 CFAP77Q6ZQR2 320 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 FAM219AQ8IW50 185 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 TEX19Q8NA77 164 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 OR11G2Q8NGC1 345 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 MNTQ99583 582 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF701Q9NV72 531 aaPredicted RBP13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 IGKV3D-11A0A0A0MRZ8 115 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 GNB3P16520 340 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 OR3A3P47888 321 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 OR3A2P47893 321 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 MFSD13AQ14CX5 517 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 RBMS2Q15434 407 aaKnown RBP13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 EXOSC6Q5RKV6 272 aaKnown RBP13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 OR14L1PQ8NHC6 308 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 LRRC20Q8TCA0 184 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 RNF128Q8TEB7 428 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 ASB5Q8WWX0 329 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 SCMH1Q96GD3 660 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 MAB21L2Q9Y586 359 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 IGHV5-10-1A0A0J9YXX1 117 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 TMEM272A0A1B0GTI8 110 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 GLSO94925 669 aaPredicted RBP13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 C4BPBP20851 252 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 DYRK1AQ13627 763 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 TRAPPC6BQ86SZ2 158 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 APCDD1LQ8NCL9 501 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 OR52N4Q8NGI2 321 aa13.72□□□□□ -0.21
TMEM55B-207ENST00000557041 NSG1A0A0A6YYJ2 146 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF878C9JN71 531 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 RAMP1O60894 148 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF254O75437 659 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 LAP3P28838 519 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 APOBEC1P41238 236 aaKnown RBP13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 STARP49675 285 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 TNK1Q13470 666 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 COL13A1Q5TAT6 717 aaPredicted RBP13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 ALKBH2Q6NS38 261 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 ZNF767PQ75MW2 155 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 BEST3Q8N1M1 668 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 RHBDD1Q8TEB9 315 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 CHRDQ9H2X0 955 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 DLL4Q9NR61 685 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 GSKIPQ9P0R6 139 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 UBQLN2Q9UHD9 624 aa13.71□□□□□ -0.21
TMEM55B-207ENST00000557041 ERVH48-1M5A8F1 160 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 ZNF208O43345 1280 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 XRCC3O43542 346 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 CSF1P09603 554 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 EPHA8P29322 1005 aaPredicted RBP13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 FNDC7Q5VTL7 733 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 OLFML2AQ68BL7 652 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 TCEAL6Q6IPX3 200 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 LRRC75AQ8NAA5 344 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 ZSCAN1Q8NBB4 408 aa13.71□□□□□ -0.22
TMEM55B-207ENST00000557041 SLC26A10Q8NG04 563 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms