RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 MS4A18H0YCH9 400 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 J3QRK9 145 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ZNF593O00488 134 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 GABRPO00591 440 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PDCD5O14737 125 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 RGS5O15539 181 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TLX3O43711 291 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 EFNA2O43921 213 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 KALRNO60229 2985 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC16A7O60669 478 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 EIF1BO60739 113 aaKnown RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC19A2O60779 497 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PFDN1O60925 122 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 KHDRBS3O75525 346 aaKnown RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 SERPINI2O75830 405 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TNFSF15O95150 251 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 VAMP5O95183 116 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 LALBAP00709 142 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 HLA-DQA2P01906 255 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 APOA1P02647 267 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 P04436 131 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ZNF823P16415 610 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ALOX5APP20292 161 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MYL9P24844 172 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PTBP1P26599 531 aaKnown RBP eCLIP3.96□□□□□ -1.78
SRP54-212ENST00000556992 DPP4P27487 766 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 OTX2P32243 289 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TGFBR1P36897 503 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 CD79BP40259 229 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PTGDSP41222 190 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NAA10P41227 235 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 PSMD7P51665 324 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 HCCSP53701 268 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 OR2B6P58173 313 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 DEFA1P59665 94 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 DEFA3P59666 94 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PPP3R1P63098 170 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC35A1P78382 337 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 HSF1Q00613 529 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TLE3Q04726 772 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 GLO1Q04760 184 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC3A1Q07837 685 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PUDPQ08623 228 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MYBPHQ13203 477 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ATP1A4Q13733 1029 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 OR7A5Q15622 319 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 HSPB2Q16082 182 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TRIM16LQ309B1 348 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PLPPR5Q32ZL2 321 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MS4A18Q3C1V0 323 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TMEM176BQ3YBM2 270 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 GXYLT1Q4G148 440 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 YIF1BQ5BJH7 314 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MESTQ5EB52 335 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TEX30Q5JUR7 227 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ACER2Q5QJU3 275 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 THEM4Q5T1C6 240 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ZNF684Q5T5D7 378 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 DDI2Q5TDH0 399 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 LINC01590Q5TEZ4 76 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TIGD3Q6B0B8 471 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TMEM225Q6GV28 225 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC18B1Q6NT16 456 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 KCTD18Q6PI47 426 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 XKRXQ6PP77 449 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ARL9Q6T311 187 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 METAP1DQ6UB28 335 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 UNQ9370/PRO34162Q6UXP9 181 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TMEM91Q6ZNR0 172 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SLC35D2Q76EJ3 337 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TRILQ7L0X0 811 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TIPARPQ7Z3E1 657 aaKnown RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 FAM220AQ7Z4H9 259 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 GLRX5Q86SX6 157 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PIP4P1Q86T03 277 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 CCDC190Q86UF4 302 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 CDC20BQ86Y33 519 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 MARCH9Q86YJ5 346 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 RAB43Q86YS6 212 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 TIGD4Q8IY51 512 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PM20D2Q8IYS1 436 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 GHDCQ8N2G8 530 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 GTPBP8Q8N3Z3 284 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 PARP16Q8N5Y8 322 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ZFP41Q8N8Y5 198 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 FADS6Q8N9I5 356 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 SUMF1Q8NBK3 374 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ADPRHL1Q8NDY3 354 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NLGN4YQ8NFZ3 816 aaPredicted RBP3.96□□□□□ -1.78
SRP54-212ENST00000556992 OR51L1Q8NGJ5 315 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 OR1J4Q8NGS1 313 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NEIL3Q8TAT5 605 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 ZNF519Q8TB69 540 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 CT55Q8WUE5 264 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 THEM6Q8WUY1 208 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 THRSPQ92748 146 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PPP1R14BQ96C90 147 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 NTNG2Q96CW9 530 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 PELI1Q96FA3 418 aa3.96□□□□□ -1.78
SRP54-212ENST00000556992 C5orf34Q96MH7 638 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms