RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 DOK1Q99704 481 aa12.12□□□□□ -0.47
SLIRP-207ENST00000556831 REG4Q9BYZ8 158 aa12.12□□□□□ -0.47
SLIRP-207ENST00000556831 PLA2G12AQ9BZM1 189 aa12.12□□□□□ -0.47
SLIRP-207ENST00000556831 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
SLIRP-207ENST00000556831 FN3KQ9H479 309 aa12.12□□□□□ -0.47
SLIRP-207ENST00000556831 ARMC1Q9NVT9 282 aa12.12□□□□□ -0.47
SLIRP-207ENST00000556831 NSD1Q96L73 2696 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-207ENST00000556831 IGLV1-36A0A0B4J1U3 117 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 OR6C6A6NF89 314 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 MPZL1O95297 269 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 FCGR1AP12314 374 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 DAOP14920 347 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 ALDH3B1P43353 468 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 PPP1CBP62140 327 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 TEKQ02763 1124 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 VASH1Q7L8A9 365 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-207ENST00000556831 OR6V1Q8N148 313 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 LNX2Q8N448 690 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 CYB561A3Q8NBI2 242 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 ZNF540Q8NDQ6 660 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 DNAJC9Q8WXX5 260 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 PLEKHA8Q96JA3 519 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 NIPSNAP1Q9BPW8 284 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 HDHD2Q9H0R4 259 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 VCX3BQ9H321 246 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 ATPIF1Q9UII2 106 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 KCNG2Q9UJ96 466 aa12.11□□□□□ -0.47
SLIRP-207ENST00000556831 LOC100509620A0A075B734 347 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 IGHV4-30-2A0A087WSY4 118 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 LOC390937A0A1W2PQ73 354 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 OR6C68A6NDL8 312 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 H3BSA7 217 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 TPD52L2O43399 206 aaKnown RBP12.1□□□□□ -0.47
SLIRP-207ENST00000556831 TIPRLO75663 272 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 LY6HO94772 140 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 SCG5P05408 212 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 HEXAP06865 529 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 GAAP10253 952 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 FASP25445 335 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 RGS6P49758 472 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 BLVRAP53004 296 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 MAD2L1BPQ15013 274 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-207ENST00000556831 KCNMB1Q16558 191 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 MEP1BQ16820 701 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 MSMPQ1L6U9 139 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 ALKBH6Q3KRA9 238 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 ZMAT1Q5H9K5 638 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 SPATA46Q5T0L3 261 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 SLC27A4Q6P1M0 643 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 ZBTB46Q86UZ6 589 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 SLC37A3Q8NCC5 494 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 MAPK1IP1LQ8NDC0 245 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 PAPD5Q8NDF8 572 aaKnown RBP12.1□□□□□ -0.47
SLIRP-207ENST00000556831 SLC26A10Q8NG04 563 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 OR8D4Q8NGM9 314 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 OR1F12Q8NHA8 337 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 IPCEF1Q8WWN9 437 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-207ENST00000556831 PITX2Q99697 317 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 GRIP1Q9Y3R0 1128 aa12.1□□□□□ -0.47
SLIRP-207ENST00000556831 TLN2Q9Y4G6 2542 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 TMEM129A0AVI4 362 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 DCTN6O00399 190 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 RER1O15258 196 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 GPANK1O95872 356 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 ZNF250P15622 560 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 TUBG1P23258 451 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 FMO3P31513 532 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 GRK5P34947 590 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 WNT5AP41221 380 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 ERVS71-1P61550 626 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 DBPQ10586 325 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-207ENST00000556831 CRMP1Q14194 572 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 PCGF3Q3KNV8 242 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 ELFN2Q5R3F8 820 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 OTPQ5XKR4 325 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 SHQ1Q6PI26 577 aaKnown RBP12.09□□□□□ -0.47
SLIRP-207ENST00000556831 RFPL4BQ6ZWI9 263 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 LRP11Q86VZ4 500 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 ZNF101Q8IZC7 436 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 OR5L1Q8NGL2 311 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 OR9Q1Q8NGQ5 310 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 OR6K6Q8NGW6 343 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 SLC25A40Q8TBP6 338 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 C10orf105Q8TEF2 133 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 NRBF2Q96F24 287 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 DCLRE1CQ96SD1 692 aaKnown RBP12.09□□□□□ -0.47
SLIRP-207ENST00000556831 COQ7Q99807 217 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 PRRG3Q9BZD7 231 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 OR2J1Q9GZK6 312 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 HINT3Q9NQE9 182 aaKnown RBP12.09□□□□□ -0.47
SLIRP-207ENST00000556831 TUBG2Q9NRH3 451 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 CYSLTR2Q9NS75 346 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 CGGBP1Q9UFW8 167 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-207ENST00000556831 AP4S1Q9Y587 144 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 CR1P17927 2039 aa12.09□□□□□ -0.47
SLIRP-207ENST00000556831 IGLV3-9A0A075B6K5 115 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms