RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 KLF3P57682 345 aaPredicted RBP8.83□□□□□ -1
SHMT2-224ENST00000556737 ALKBH6Q3KRA9 238 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 OTPQ5XKR4 325 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 GPR139Q6DWJ6 353 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 ZNF774Q6NX45 483 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 SMARCD3Q6STE5 483 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 SYT9Q86SS6 491 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 ADCK1Q86TW2 530 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 ZNF555Q8NEP9 628 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 SYNPRQ8TBG9 265 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 UBASH3BQ8TF42 649 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 YIPF5Q969M3 257 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 FEVQ99581 238 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 OSBPL10Q9BXB5 764 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 BCL2L14Q9BZR8 327 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 NDEL1Q9GZM8 345 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 SYT4Q9H2B2 425 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 KCNN2Q9H2S1 579 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 PAPOLBQ9NRJ5 636 aaKnown RBP8.83□□□□□ -1
SHMT2-224ENST00000556737 DUSP13Q9UII6 198 aa8.83□□□□□ -1
SHMT2-224ENST00000556737 TANC2Q9HCD6 1990 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.82□□□□□ -13e-7■■■■■ 53.9
SHMT2-224ENST00000556737 IGLV1-36A0A0B4J1U3 117 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 C5orf49A4QMS7 147 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 LRP5LA4QPB2 252 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 H3BN98 237 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 DCTN6O00399 190 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 XKRYO14609 159 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 LILRA1O75019 489 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 MITFO75030 526 aaPredicted RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 RP2O75695 350 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 IGHV3-13P01766 116 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 ALPLP05186 524 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 LCKP06239 509 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 GAAP10253 952 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 APEHP13798 732 aaKnown RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 POU1F1P28069 291 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 CDKN2AP42771 156 aaKnown RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 RAD52P43351 418 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 MAGEB1P43366 347 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 DAPP51397 102 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 HMGA2P52926 109 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 DBPQ10586 325 aaPredicted RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 RFX4Q33E94 735 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 SPATA46Q5T0L3 261 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 PGBD2Q6P3X8 592 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 DPY19L2P2Q6ZN68 376 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 ZNF620Q6ZNG0 422 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 DHRSXQ8N5I4 330 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 OR1J1Q8NGS3 322 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 GNPDA2Q8TDQ7 276 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 IPCEF1Q8WWN9 437 aaPredicted RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 MSI2Q96DH6 328 aaKnown RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 MARS2Q96GW9 593 aaKnown RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 NIPSNAP1Q9BPW8 284 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 NUAK2Q9H093 628 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 OR52D1Q9H346 318 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 MS4A5Q9H3V2 200 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 TOR3AQ9H497 397 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 TMEM160Q9NX00 188 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 USE1Q9NZ43 259 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 TAAR3PQ9P1P4 343 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 TIMM10BQ9Y5J6 103 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 IER3IP1Q9Y5U9 82 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 MALRD1Q5VYJ5 2156 aa8.82□□□□□ -1
SHMT2-224ENST00000556737 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
SHMT2-224ENST00000556737 ANK2Q01484 3957 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 ARRDC5A6NEK1 342 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 C12orf71A8MTZ7 269 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 C17orf100A8MU93 164 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 H0YJX3 145 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 DOK2O60496 412 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 SLC16A7O60669 478 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 MPZL1O95297 269 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 GPANK1O95872 356 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 NGFP01138 241 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 GASTP01350 101 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 COX5BP10606 129 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 CCNOP22674 350 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 GZMKP49863 264 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 GDI2P50395 445 aaKnown RBP8.81□□□□□ -1
SHMT2-224ENST00000556737 MMP15P51511 669 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 PCBD1P61457 104 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 MRPS11P82912 194 aaKnown RBP8.81□□□□□ -1
SHMT2-224ENST00000556737 GLO1Q04760 184 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 AQP6Q13520 282 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 NKPD1Q17RQ9 610 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 MBNL2Q5VZF2 373 aaKnown RBP8.81□□□□□ -1
SHMT2-224ENST00000556737 CYB5R2Q6BCY4 276 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 ZNF770Q6IQ21 691 aaPredicted RBP8.81□□□□□ -1
SHMT2-224ENST00000556737 C1orf94Q6P1W5 598 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 VASH1Q7L8A9 365 aaPredicted RBP8.81□□□□□ -1
SHMT2-224ENST00000556737 ZNF540Q8NDQ6 660 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 SLC25A40Q8TBP6 338 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 C1orf159Q96HA4 380 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 CNBD2Q96M20 576 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 TSSK2Q96PF2 358 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 SNX18Q96RF0 628 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 WACQ9BTA9 647 aa8.81□□□□□ -1
SHMT2-224ENST00000556737 ADI1Q9BV57 179 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms