RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 CMTM8Q8IZV2 173 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 TTC29Q8NA56 475 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 OR10R2Q8NGX6 335 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 UBALD1Q8TB05 177 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 NUBPLQ8TB37 319 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF721Q8TF20 911 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 CERS2Q96G23 380 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 BMFQ96LC9 184 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 COL21A1Q96P44 957 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 OPALINQ96PE5 141 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 OR5B12Q96R08 314 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF430Q9H8G1 570 aaPredicted RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 NOX3Q9HBY0 568 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 SLC40A1Q9NP59 571 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 ACP6Q9NPH0 428 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 AGPAT4Q9NRZ5 378 aa2.51□□□□□ -2.01
SCFD1-221ENST00000556534 CCDC59Q9P031 241 aaKnown RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 RCL1Q9Y2P8 373 aaKnown RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 YTHDF2Q9Y5A9 579 aaKnown RBP2.51□□□□□ -2.01
SCFD1-221ENST00000556534 CAMTA1Q9Y6Y1 1673 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 GAKO14976 1311 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 NFASCO94856 1347 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 A0A1B0GW55 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SERPINE3A8MV23 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 H3BNH8 94 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 M0R3G1 203 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SCAMP2O15127 329 aaKnown RBP2.5□□□□□ -2.01
SCFD1-221ENST00000556534 UTS2O95399 124 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 CTDNEP1O95476 244 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SNAI1O95863 264 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-221ENST00000556534 TGM6O95932 706 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 CSTAP01040 98 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 HLA-HP01893 362 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 CLTAP09496 248 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4L2P0CJ85 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4L3P0CJ86 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4L5P0CJ88 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4L6P0CJ89 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4L7P0CJ90 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 U2AF2P26368 475 aaKnown RBP eCLIP2.5□□□□□ -2.012e-6■■■■□ 24.2
SCFD1-221ENST00000556534 CD82P27701 267 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SERPINB5P36952 375 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 GPX4P36969 197 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-221ENST00000556534 XIAPP98170 497 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 AQP6Q13520 282 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 TRAM2Q15035 370 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SF3A2Q15428 464 aaKnown RBP2.5□□□□□ -2.01
SCFD1-221ENST00000556534 ZNF726P1Q15940 193 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 PGGHGQ32M88 737 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 TTLL9Q3SXZ7 439 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 ZBED5Q49AG3 693 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 ABCA11PQ4W5N1 156 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 TTC23LQ6PF05 361 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4L9Q6RFH8 374 aaPredicted RBP2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SPESP1Q6UW49 350 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 LINC00523Q86TU6 105 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 APRG1Q8IVJ8 170 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 JAGN1Q8N5M9 183 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 C15orf56Q8N910 161 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 PROKR2Q8NFJ6 384 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SDR42E1Q8WUS8 393 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DEDD2Q8WXF8 326 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 ECHDC3Q96DC8 303 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 CFAP53Q96M91 514 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 WFIKKN1Q96NZ8 548 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 ZYG11BQ9C0D3 744 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 IL22Q9GZX6 179 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 CHRAC1Q9NRG0 131 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 SAMSN1Q9NSI8 373 aaKnown RBP2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DUX4Q9UBX2 424 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 OR12D3Q9UGF7 316 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 GOLT1BQ9Y3E0 138 aa2.5□□□□□ -2.01
SCFD1-221ENST00000556534 DOCK9Q9BZ29 2069 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 CEMIPQ8WUJ3 1361 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 MN1Q10571 1320 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 IGHV3-66A0A0C4DH42 116 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 A0A1W2PPV4 95 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 ERICH4A6NGS2 130 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 XKRYO14609 159 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 SLC9A3R1O14745 358 aaPredicted RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 SPOPO43791 374 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 DPM1O60762 260 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 C6orf47O95873 294 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 SMIM10L1P0DMW3 83 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 BMI1P35226 326 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 CCR8P51685 355 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 STXBP1P61764 594 aaKnown RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 NUTF2P61970 127 aaKnown RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 RPS21P63220 83 aaKnown RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 MXD1Q05195 221 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 TMED1Q13445 227 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 WDR43Q15061 677 aaKnown RBP eCLIP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 UBE2SQ16763 222 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 AADACL4Q5VUY2 407 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 LINC00173Q6ZV60 143 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 H2AFVQ71UI9 128 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 MRPL21Q7Z2W9 205 aaKnown RBP2.49□□□□□ -2.01
SCFD1-221ENST00000556534 VTCN1Q7Z7D3 282 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 ZFP41Q8N8Y5 198 aa2.49□□□□□ -2.01
SCFD1-221ENST00000556534 OR5K2Q8NHB8 316 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms