RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 HAVCR1Q96D42 359 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 MPP4Q96JB8 637 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 RASSF4Q9H2L5 321 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 TUBG2Q9NRH3 451 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 TBCCD1Q9NVR7 557 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 SLC25A37Q9NYZ2 338 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 STARD10Q9Y365 291 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 FAM96BQ9Y3D0 163 aa11.57□□□□□ -0.56
ACTN1-219ENST00000556432 A0A0U1RQK1 487 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 C12orf71A8MTZ7 269 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF879B4DU55 563 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 DOK2O60496 412 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 THY1P04216 161 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 FUT1P19526 365 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 IER3P46695 156 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 NPTX1Q15818 432 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 VAX1Q5SQQ9 334 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 ARMC4Q5T2S8 1044 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 LYPD2Q6UXB3 125 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 DCDC5Q6ZRR9 648 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 SLC30A8Q8IWU4 369 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 PDZD9Q8IXQ8 264 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 OR13G1Q8NGZ3 307 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 MOSPD2Q8NHP6 518 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 SGCDQ92629 289 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 RBP7Q96R05 134 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 TBX15Q96SF7 602 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 TMEM38AQ9H6F2 299 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 KCNK9Q9NPC2 374 aa11.56□□□□□ -0.56
ACTN1-219ENST00000556432 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.56□□□□□ -0.56
ACTN1-219ENST00000556432 V9GYY5 206 aaPredicted RBP11.56□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF816-ZNF321PA0A0X1KG74 233 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 RGS16O15492 202 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-219ENST00000556432 OR7A10O76100 309 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 LYPD3O95274 346 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 VSIG8P0DPA2 414 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 CD247P20963 164 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 MSR1P21757 451 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 CD276Q5ZPR3 534 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 SLC25A47Q6Q0C1 308 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 LDLRAD3Q86YD5 345 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 RBM45Q8IUH3 476 aaKnown RBP11.55□□□□□ -0.56
ACTN1-219ENST00000556432 MSRB3Q8IXL7 192 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 CLDN22Q8N7P3 220 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 C19orf18Q8NEA5 215 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 PFN4Q8NHR9 129 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.55□□□□□ -0.56
ACTN1-219ENST00000556432 PTP4A1Q93096 173 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 PPP1R14AQ96A00 147 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 NMD3Q96D46 503 aaKnown RBP11.55□□□□□ -0.56
ACTN1-219ENST00000556432 SGTBQ96EQ0 304 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 COG8Q96MW5 612 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 WDFY2Q96P53 400 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 C16orf95Q9H693 158 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 MEPEQ9NQ76 525 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-219ENST00000556432 PTTG3PQ9NZH4 202 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 SLAMF8Q9P0V8 285 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 CORO2BQ9UQ03 480 aa11.55□□□□□ -0.56
ACTN1-219ENST00000556432 PLXNB1O43157 2135 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ANKRD61A6NGH8 418 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 EVPLLA8MZ36 301 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 F5H5P2 479 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 LIPFP07098 398 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 RAC2P15153 192 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 HOXB9P17482 250 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-219ENST00000556432 STX1BP61266 288 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 SCRN3Q0VDG4 424 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 DBPQ10586 325 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ENDOGQ14249 297 aaKnown RBP11.54□□□□□ -0.56
ACTN1-219ENST00000556432 DUSP7Q16829 419 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 KRT71Q3SY84 523 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 OR2T2Q6IF00 324 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 C11orf44Q8N8P7 122 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 PNLDC1Q8NA58 520 aaKnown RBP11.54□□□□□ -0.56
ACTN1-219ENST00000556432 BHLHE23Q8NDY6 225 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 OR11L1Q8NGX0 322 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF582Q96NG8 517 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-219ENST00000556432 OR52B2Q96RD2 323 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF426Q9BUY5 554 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ALG12Q9BV10 488 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 TXNIPQ9H3M7 391 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 EMC7Q9NPA0 242 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ERVK-18Q9QC07 812 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 TMCC3Q9ULS5 477 aa11.54□□□□□ -0.56
ACTN1-219ENST00000556432 ELOVL7A1L3X0 281 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 SGCEO43556 437 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 MT-ND1P03886 318 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 COX5BP10606 129 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 MMP9P14780 707 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 FUT4P22083 530 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 NPY4RP50391 375 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 HERPUD1Q15011 391 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 LAPTM4AQ15012 233 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 CYP51A1Q16850 503 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF181Q2M3W8 571 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 LRIF1Q5T3J3 769 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 ZNF841Q6ZN19 808 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 TSPYL5Q86VY4 417 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-219ENST00000556432 ANKRD42Q8N9B4 389 aa11.53□□□□□ -0.56
ACTN1-219ENST00000556432 BOLLQ8N9W6 283 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms