RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 B9D1Q9UPM9 204 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 BAIAP2Q9UQB8 552 aa9.89□□□□□ -0.83
SLIRP-205ENST00000556310 SONP18583 2426 aaKnown RBP9.88□□□□□ -0.83
SLIRP-205ENST00000556310 LOC390937A0A1W2PQ73 354 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 OR6C68A6NDL8 312 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 OR6C6A6NF89 314 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 VWC2LB2RUY7 222 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 GNGT2O14610 69 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 FKBP6O75344 327 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 SOX14O95416 240 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 ABHD16AO95870 558 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 CLPTM1O96005 669 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 ALDH3B1P43353 468 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 CENPAP49450 140 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 CBX1P83916 185 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 LOXL1Q08397 574 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-205ENST00000556310 COX10Q12887 443 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 MAD2L1BPQ15013 274 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-205ENST00000556310 NKPD1Q17RQ9 610 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 SLC35F1Q5T1Q4 408 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 SAMD5Q5TGI4 173 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 OTPQ5XKR4 325 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 ARL9Q6T311 187 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 Q71RC1 249 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-205ENST00000556310 PAPD5Q8NDF8 572 aaKnown RBP9.88□□□□□ -0.83
SLIRP-205ENST00000556310 OR2T33Q8NG76 320 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 ABHD4Q8TB40 342 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 SNX33Q8WV41 574 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 FEVQ99581 238 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 NIPSNAP1Q9BPW8 284 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 TSSK6Q9BXA6 273 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 HDHD2Q9H0R4 259 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 MMADHCQ9H3L0 296 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-205ENST00000556310 FN3KQ9H479 309 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 ELOVL3Q9HB03 270 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 ARMC1Q9NVT9 282 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 SLCO1C1Q9NYB5 712 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 TAAR3PQ9P1P4 343 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 LHFPL6Q9Y693 200 aa9.88□□□□□ -0.83
SLIRP-205ENST00000556310 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.87□□□□□ -0.834e-15■■■■■ 30.4
SLIRP-205ENST00000556310 RER1O15258 196 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 E2F6O75461 281 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 GPANK1O95872 356 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 IGHV3-13P01766 116 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 TFP02787 698 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 TP53P04637 393 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 DAOP14920 347 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 GCH1P30793 250 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 ARHGDIAP52565 204 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 PPP1CBP62140 327 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 HIST1H3AP68431 136 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 CARTPTQ16568 116 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 MOGQ16653 247 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 MEP1BQ16820 701 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF718Q3SXZ3 478 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 SLC36A3Q495N2 470 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 CCDC92Q53HC0 331 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 SPATA46Q5T0L3 261 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 HIST2H3PS2Q5TEC6 136 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 MBNL2Q5VZF2 373 aaKnown RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 HIST2H3AQ71DI3 136 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 TMEM179BQ7Z7N9 219 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 CYB561A3Q8NBI2 242 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 GJC3Q8NFK1 279 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 OR2T4Q8NH00 348 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 OR4Q3Q8NH05 313 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 OR1F12Q8NHA8 337 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 SLC25A40Q8TBP6 338 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 TEX47Q8TBZ9 253 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 IPCEF1Q8WWN9 437 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 SLCO4A1Q96BD0 722 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 MARS2Q96GW9 593 aaKnown RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 C4orf45Q96LM5 186 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 DDOQ99489 341 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 SRA1Q9HD15 236 aaKnown RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 BRD7Q9NPI1 651 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 TBCCD1Q9NVR7 557 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 PDP1Q9P0J1 537 aaPredicted RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 DNAJB9Q9UBS3 223 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 KCNG2Q9UJ96 466 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 KLHL21Q9UJP4 597 aa9.87□□□□□ -0.83
SLIRP-205ENST00000556310 ANK3Q12955 4377 aaKnown RBP9.87□□□□□ -0.83
SLIRP-205ENST00000556310 ABCA2Q9BZC7 2435 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 C17orf100A8MU93 164 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 J3QW42 95 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 DEAF1O75398 565 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 NGFP01138 241 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 IFNGP01579 166 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 MT-ND5P03915 603 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 NAT2P11245 290 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 USF1P22415 310 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 GIFP27352 417 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 NR4A2P43354 598 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 ERFP50548 548 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 TEKQ02763 1124 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 DBPQ10586 325 aaPredicted RBP9.86□□□□□ -0.83
SLIRP-205ENST00000556310 CRMP1Q14194 572 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 TMEM249Q2WGJ8 235 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 PCGF3Q3KNV8 242 aa9.86□□□□□ -0.83
SLIRP-205ENST00000556310 ZNF362Q5T0B9 420 aaPredicted RBP9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms