RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 CCDC121Q6ZUS5 278 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 MBOAT2Q6ZWT7 520 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 P2RY8Q86VZ1 359 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ZNF575Q86XF7 245 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 RNF113BQ8IZP6 322 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 OR1K1Q8NGR3 316 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 OR13C2Q8NGS9 318 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 OR6S1Q8NH40 331 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 GNPDA2Q8TDQ7 276 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ACOT11Q8WXI4 607 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 AKAP1Q92667 903 aaKnown RBP eCLIP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 HTRA1Q92743 480 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 NEUROG1Q92886 237 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 MUL1Q969V5 352 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 TMEM45BQ96B21 275 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 OTULINQ96BN8 352 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 RSRC1Q96IZ7 334 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 FOXN4Q96NZ1 517 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ALKBH3Q96Q83 286 aaPredicted RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 FYTTD1Q96QD9 318 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 RBP7Q96R05 134 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 OR2M2Q96R28 347 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ZNF347Q96SE7 839 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 PIP5K1AQ99755 562 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 IFT27Q9BW83 186 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ULBP2Q9BZM5 246 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 SLC19A3Q9BZV2 496 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 TRIM15Q9C019 465 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 POLR2J2Q9GZM3 115 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 NDEL1Q9GZM8 345 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 POLR2J3Q9H1A7 115 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 SLC17A5Q9NRA2 495 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 CISD1Q9NZ45 108 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 NDUFAF4Q9P032 175 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ACTR3BQ9P1U1 418 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ZNF346Q9UL40 294 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 PRPF19Q9UMS4 504 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 LAMP3Q9UQV4 416 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 AMDHD2Q9Y303 409 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 RNF115Q9Y4L5 304 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 IER3IP1Q9Y5U9 82 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 U3KQV3 271 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 PLCE1Q9P212 2302 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 SPENQ96T58 3664 aaKnown RBP4.05□□□□□ -1.76
ATXN3-237ENST00000556274 DCHS2Q6V1P9 2916 aa4.05□□□□□ -1.76
ATXN3-237ENST00000556274 ASH1LQ9NR48 2969 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 TRBV4-1A0A0J9YWV2 114 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 DEFB108AA8MXU0 73 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 H7C1C5 153 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SOCS2O14508 198 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SMPD2O60906 423 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 E2F6O75461 281 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 TRMUO75648 421 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 CIB2O75838 187 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 CCNB2O95067 398 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 FARS2O95363 451 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 CST1P01037 141 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 IGHG1P01857 330 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 HLA-HP01893 362 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 CRYAAP02489 173 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 RAF1P04049 648 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 ASAH2BP0C7U1 165 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 B4GALT1P15291 398 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 POU1F1P28069 291 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 CDAP32320 146 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 IFNGR2P38484 337 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 DAP3P51398 398 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 IDH3GP51553 393 aaPredicted RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 P2RY4P51582 365 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 NR1H2P55055 460 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 RPL27P61353 136 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 LCN6P62502 163 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 CFHR3Q02985 330 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SRSF4Q08170 494 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 ZP4Q12836 540 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 TRAP1Q12931 704 aaKnown RBP4.04□□□□□ -1.76
ATXN3-237ENST00000556274 FLOT2Q14254 428 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SEC23BQ15437 767 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 ACKR1Q16570 336 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 TBRG1Q3YBR2 411 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 C4orf46Q504U0 113 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 TMEM53Q6P2H8 277 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SMARCD3Q6STE5 483 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 DCDC5Q6ZRR9 648 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 LINGO2Q7L985 606 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SLC46A3Q7Z3Q1 461 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 C20orf196Q8IYI0 205 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 OFCC1Q8IZS5 231 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 FBXL14Q8N1E6 418 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 ARHGAP24Q8N264 748 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 WDR31Q8NA23 367 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 ICA1LQ8NDH6 482 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 KBTBD8Q8NFY9 601 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 OR4K5Q8NGD3 323 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 OR6X1Q8NH79 312 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 SLC7A13Q8TCU3 470 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 DDB2Q92466 427 aa4.04□□□□□ -1.76
ATXN3-237ENST00000556274 BCL2L2Q92843 193 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms