RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 G6PC2Q9NQR9 355 aa13.02□□□□□ -0.32
VPS33B-205ENST00000556096 CENPMQ9NSP4 180 aa13.02□□□□□ -0.32
VPS33B-205ENST00000556096 OR52A1Q9UKL2 312 aa13.02□□□□□ -0.32
VPS33B-205ENST00000556096 CFAP47Q6ZTR5 3102 aa13.02□□□□□ -0.32
VPS33B-205ENST00000556096 ACACBO00763 2458 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 TMEM269A0A1B0GVZ9 245 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 FAM25AB3EWG3 89 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 FAM25CB3EWG5 89 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 FAM25GB3EWG6 89 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 DHHO43323 396 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 CYTIPO60759 359 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 PTTG1O95997 202 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 RFC3P40938 356 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 GUCA1AP43080 201 aaPredicted RBP13.02□□□□□ -0.33
VPS33B-205ENST00000556096 MAGEA5P43359 124 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 SELENOPP49908 381 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 PSMD7P51665 324 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 CDC20Q12834 499 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 BCL2A1Q16548 175 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 BAK1Q16611 211 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 PHYHD1Q5SRE7 291 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF704Q6ZNC4 412 aaPredicted RBP13.02□□□□□ -0.33
VPS33B-205ENST00000556096 LRRTM1Q86UE6 522 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 OR51A4Q8NGJ6 313 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 TMEM106AQ96A25 262 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 ORAI1Q96D31 301 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 MRI1Q9BV20 369 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 C14orf119Q9NWQ9 140 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 FBXL3Q9UKT7 428 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 SPATA2Q9UM82 520 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 POLR1DQ9Y2S0 133 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 EMC9Q9Y3B6 208 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 V9GY05 133 aa13.02□□□□□ -0.33
VPS33B-205ENST00000556096 ANKRD11Q6UB99 2663 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-205ENST00000556096 TPRP12270 2363 aaKnown RBP13.01□□□□□ -0.33
VPS33B-205ENST00000556096 MAP1BP46821 2468 aaKnown RBP13.01□□□□□ -0.33
VPS33B-205ENST00000556096 IFITM5A6NNB3 132 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF891A8MT65 544 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-205ENST00000556096 FAM166BA8MTA8 275 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF878C9JN71 531 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 AIPO00170 330 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 CELA3AP09093 270 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 IL7P13232 177 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 MSR1P21757 451 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 PYDC2Q56P42 97 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 TMEM244Q5VVB8 128 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 KLHL24Q6TFL4 600 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 SAMD12Q8N8I0 201 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 KDF1Q8NAX2 398 aaPredicted RBP13.01□□□□□ -0.33
VPS33B-205ENST00000556096 ROBO4Q8WZ75 1007 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 PPP1R14AQ96A00 147 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 SLC25A18Q9H1K4 315 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 NELFAQ9H3P2 528 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 ACKR4Q9NPB9 350 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 FAM206AQ9NX38 181 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 GTF2A1LQ9UNN4 478 aa13.01□□□□□ -0.33
VPS33B-205ENST00000556096 SLC43A1O75387 559 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 PAHP00439 452 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 APOA1P02647 267 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF708P17019 499 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 ACHEP22303 614 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 AZGP1P25311 298 aaKnown RBP13□□□□□ -0.33
VPS33B-205ENST00000556096 TALDO1P37837 337 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF84P51523 738 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 CLDN18P56856 261 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 PPIAP62937 165 aaKnown RBP13□□□□□ -0.33
VPS33B-205ENST00000556096 ARG2P78540 354 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 ODF4Q2M2E3 257 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 FCRLAQ7L513 359 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 TMEM178AQ8NBL3 297 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 TSEN15Q8WW01 171 aaKnown RBP13□□□□□ -0.33
VPS33B-205ENST00000556096 ASB5Q8WWX0 329 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 KCNJ15Q99712 375 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 ULBP2Q9BZM5 246 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 PAQR5Q9NXK6 330 aaPredicted RBP13□□□□□ -0.33
VPS33B-205ENST00000556096 EXTL2Q9UBQ6 330 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 HHLA2Q9UM44 414 aa13□□□□□ -0.33
VPS33B-205ENST00000556096 TTLL8A6PVC2 850 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 EIF4EP06730 217 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 CSF3P09919 207 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 UBCP0CG48 685 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ADRA2CP18825 462 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 SCN1BQ07699 218 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 IL18Q14116 193 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 SLC10A1Q14973 349 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 SGCAQ16586 387 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF766Q5HY98 468 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 BCL2L15Q5TBC7 163 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 AAED1Q7RTV5 226 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 MEIOBQ8N635 442 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ZNF433Q8N7K0 673 aaPredicted RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 NABP1Q96AH0 204 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 TMEM45BQ96B21 275 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 SLC6A15Q9H2J7 730 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 MOB1AQ9H8S9 216 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 BRD7Q9NPI1 651 aa12.99□□□□□ -0.33
VPS33B-205ENST00000556096 PNRC2Q9NPJ4 139 aaKnown RBP12.99□□□□□ -0.33
VPS33B-205ENST00000556096 ASH2LQ9UBL3 628 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms