RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 SIGLEC7Q9Y286 467 aa16.66■□□□□ 0.26
PRKCH-219ENST00000555906 A0A1W2PRQ8 180 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 OR6C6A6NF89 314 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 NDUFB2O95178 105 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 LSM6P62312 80 aaKnown RBP16.65■□□□□ 0.26
PRKCH-219ENST00000555906 GUCY1A3Q02108 690 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 DGCR6Q14129 220 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 GPR139Q6DWJ6 353 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 Q6ZR03 302 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 ADCK1Q86TW2 530 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 TREML1Q86YW5 311 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 OR2Z1Q8NG97 314 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 FAM162AQ96A26 154 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 SAMD8Q96LT4 415 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 SYT4Q9H2B2 425 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 NRIP3Q9NQ35 241 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 VSX1Q9NZR4 365 aaPredicted RBP16.65■□□□□ 0.26
PRKCH-219ENST00000555906 ASH2LQ9UBL3 628 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 IL19Q9UHD0 177 aa16.65■□□□□ 0.26
PRKCH-219ENST00000555906 CCDC22O60826 627 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 H1F0P07305 194 aaKnown RBP16.64■□□□□ 0.25
PRKCH-219ENST00000555906 NUDT2P50583 147 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 BTG1P62324 171 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 TSEN54Q7Z6J9 526 aaKnown RBP16.64■□□□□ 0.25
PRKCH-219ENST00000555906 GLB1L2Q8IW92 636 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 KLHL36Q8N4N3 616 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 GCDHQ92947 438 aaPredicted RBP16.64■□□□□ 0.25
PRKCH-219ENST00000555906 KCTD14Q9BQ13 255 aaPredicted RBP16.64■□□□□ 0.25
PRKCH-219ENST00000555906 EFCAB1Q9HAE3 211 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 ABCD2Q9UBJ2 740 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 RPS6KA6Q9UK32 745 aa16.64■□□□□ 0.25
PRKCH-219ENST00000555906 POLR3KQ9Y2Y1 108 aaPredicted RBP16.64■□□□□ 0.25
PRKCH-219ENST00000555906 A8MXK9 166 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 SURF4O15260 269 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 SLC16A7O60669 478 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 KHDRBS3O75525 346 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 ZFP36P26651 326 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 OMPP47874 163 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 RGS6P49758 472 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 HNRNPA0Q13151 305 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 FGD3Q5JSP0 725 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 DEFB108BQ8NET1 73 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 POP5Q969H6 163 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 HAVCR1Q96D42 359 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 CMBLQ96DG6 245 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 RSRC1Q96IZ7 334 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 SIGLEC11Q96RL6 698 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 DCLRE1CQ96SD1 692 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 PLA2G12AQ9BZM1 189 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 PATZ1Q9HBE1 687 aaKnown RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 KRCC1Q9NPI7 259 aaPredicted RBP16.63■□□□□ 0.25
PRKCH-219ENST00000555906 ESM1Q9NQ30 184 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 STARD10Q9Y365 291 aa16.63■□□□□ 0.25
PRKCH-219ENST00000555906 F5H0A9 414 aaPredicted RBP16.62■□□□□ 0.25
PRKCH-219ENST00000555906 PTP4A3O75365 173 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 SBK2P0C263 348 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 RAC2P15153 192 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 NCK1P16333 377 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 KCNMB1Q16558 191 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 CCDC92Q53HC0 331 aaPredicted RBP16.62■□□□□ 0.25
PRKCH-219ENST00000555906 PGM2L1Q6PCE3 622 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 OR1F12Q8NHA8 337 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 ITLN1Q8WWA0 313 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 SLC7A6Q92536 515 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 OR2V2Q96R30 315 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 NTN4Q9HB63 628 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 NDUFAF4Q9P032 175 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 PPP1R3CQ9UQK1 317 aa16.62■□□□□ 0.25
PRKCH-219ENST00000555906 COA3Q9Y2R0 106 aaPredicted RBP16.62■□□□□ 0.25
PRKCH-219ENST00000555906 SOCS2O14508 198 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 TXNDC12O95881 172 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 RHCEP18577 417 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 FPR2P25090 351 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 ERFP50548 548 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 MMP16P51512 607 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 RPS6KA3P51812 740 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 FXYD6P3P58550 94 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 ZMYND11Q15326 602 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 TUSC1Q2TAM9 212 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 ARMCX4Q5H9R4 360 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 FBXW12Q6X9E4 464 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 DPY19L2P2Q6ZN68 376 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 PTCHD4Q6ZW05 846 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 LRRC28Q86X40 367 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-219ENST00000555906 C3orf56Q8N813 242 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 ZDHHC22Q8N966 263 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 DVL3Q92997 716 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-219ENST00000555906 PTP4A1Q93096 173 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 DHRS1Q96LJ7 313 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 HDHD2Q9H0R4 259 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 RERGLQ9H628 205 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 ZNF446Q9NWS9 450 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 POLR1DQ9Y2S0 133 aa16.61■□□□□ 0.25
PRKCH-219ENST00000555906 FAM32AQ9Y421 112 aaKnown RBP16.61■□□□□ 0.25
PRKCH-219ENST00000555906 IFNL4K9M1U5 179 aa16.6■□□□□ 0.25
PRKCH-219ENST00000555906 IMPA2O14732 288 aa16.6■□□□□ 0.25
PRKCH-219ENST00000555906 ZNF12P17014 697 aa16.6■□□□□ 0.25
PRKCH-219ENST00000555906 MDH2P40926 338 aaKnown RBP16.6■□□□□ 0.25
PRKCH-219ENST00000555906 SLC6A9P48067 706 aa16.6■□□□□ 0.25
PRKCH-219ENST00000555906 SEC61A1P61619 476 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms