RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 C3orf33Q6P1S2 294 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 PEG10Q86TG7 708 aaKnown RBP10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 SRRQ9GZT4 340 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 C1orf198Q9H425 327 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 NRIP3Q9NQ35 241 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 POLE3Q9NRF9 147 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 PCDHGA1Q9Y5H4 931 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 EEF1E1-BLOC1S5C9J1V9 151 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 MRPL33O75394 65 aaKnown RBP10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 PSMA6P60900 246 aaKnown RBP10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 SIGLEC14Q08ET2 396 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 MESTQ5EB52 335 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 SPIN3Q5JUX0 258 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 SLC25A24Q6NUK1 477 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 TEX261Q6UWH6 196 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 ADGRG3Q86Y34 549 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 LINC00469Q8N7U9 141 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 OR5M9Q8NGP3 310 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 OR52I2Q8NH67 350 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 GUCD1Q96NT3 240 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 USB1Q9BQ65 265 aaKnown RBP10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 MGAT4CQ9UBM8 478 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 CYB5R1Q9UHQ9 305 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 KLHDC2Q9Y2U9 406 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 U3KQ87 197 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 MYO18BQ8IUG5 2567 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 DOPEY2Q9Y3R5 2298 aa10.99□□□□□ -0.65
ARHGEF40-206ENST00000555232 ACACBO00763 2458 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 LOC107986453A0A1B0GWG9 222 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 RBMXL2O75526 392 aaKnown RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 PRSS3P35030 304 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 RBM34P42696 430 aaKnown RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZNF85Q03923 595 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SKP2Q13309 424 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SLC16A14Q7RTX9 510 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZNF584Q8IVC4 421 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 OR2G2Q8NGZ5 317 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SAP25Q8TEE9 199 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 UBL7Q96S82 380 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 NAA11Q9BSU3 229 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 GPN1Q9HCN4 374 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 B4GALT7Q9UBV7 327 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 A3GALT2U3KPV4 340 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 NOTCH3Q9UM47 2321 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 ARRDC5A6NEK1 342 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 TMEM235A6NFC5 223 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 EIF4E2O60573 245 aaKnown RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZNF354AO60765 605 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 TRAPPC2P0DI81 140 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 TRAPPC2BP0DI82 140 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 PNLIPP16233 465 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZNF16P17020 682 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 PI3P19957 117 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 STOMP27105 288 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 LIMS1P48059 325 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 EPHA4P54764 986 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 B2MP61769 119 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 C17orf107Q6ZR85 190 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SLC16A9Q7RTY1 509 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 TCTE3Q8IZS6 198 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 NPEPL1Q8NDH3 523 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 CMBLQ96DG6 245 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 NIPAL2Q9H841 368 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 CHST11Q9NPF2 352 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 OR52A1Q9UKL2 312 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 CACNG2Q9Y698 323 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 V9GYH0 126 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 ALG1L2C9J202 215 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 LGALS8O00214 317 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 RIN1Q13671 783 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 FCN2Q15485 313 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 HES3Q5TGS1 186 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SHEQ5VZ18 495 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 BRICD5Q6PL45 260 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 CMIPQ8IY22 773 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 DTWD2Q8NBA8 298 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 OR2AE1Q8NHA4 323 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SEC22AQ96IW7 307 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 SEC22CQ9BRL7 303 aa10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 FGF20Q9NP95 211 aaPredicted RBP10.98□□□□□ -0.65
ARHGEF40-206ENST00000555232 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.97□□□□□ -0.657e-7■■■□□ 16.9
ARHGEF40-206ENST00000555232 RRAS2P62070 204 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 FHL5Q5TD97 284 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 PYHIN1Q6K0P9 492 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZNF813Q6ZN06 617 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 FAM71CQ8NEG0 241 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 SLAMF6Q96DU3 332 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 SMIM19Q96E16 107 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 HES7Q9BYE0 225 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 WIF1Q9Y5W5 379 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 SESN1Q9Y6P5 492 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 KIF26AQ9ULI4 1882 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 hCG_1807616A0A1W2PRN6 198 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 ARHGDIBP52566 201 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 CLDN15P56746 228 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 GABREP78334 506 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZXDAP98168 799 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 ZNF141Q15928 474 aa10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 ATG4DQ86TL0 474 aaPredicted RBP10.97□□□□□ -0.65
ARHGEF40-206ENST00000555232 LRRC28Q86X40 367 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms