RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 FLI1Q01543 452 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 OPCMLQ14982 345 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 TOMM20Q15388 145 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 TMEM176BQ3YBM2 270 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 EMC4Q5J8M3 183 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 CORO6Q6QEF8 472 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 PXKQ7Z7A4 578 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 UXS1Q8NBZ7 420 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 BVESQ8NE79 360 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 CT55Q8WUE5 264 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 DDIT4LQ96D03 193 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF700Q9H0M5 742 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 PTTG3PQ9NZH4 202 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 FRRS1LQ9P0K9 344 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 NPIPA1Q9UND3 350 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 MRPS18BQ9Y676 258 aaKnown RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 A0A0G2JMM0 328 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 A0A1W2PPB8 328 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 A0A1W2PRS3 328 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 KIR3DP1A8MWS1 328 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 PIN1P1O15428 100 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 UPK3AO75631 287 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 DKK1O94907 266 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 TCRBP04435 133 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 GIFP27352 417 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 Q0VFX4 171 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF684Q5T5D7 378 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 H1FNTQ75WM6 255 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 FAM220AQ7Z4H9 259 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF248Q8NDW4 579 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 OR2T35Q8NGX2 323 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 DERL3Q96Q80 235 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 ABHD1Q96SE0 405 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 METTL17Q9H7H0 456 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 AKAP7Q9P0M2 348 aaPredicted RBP10.45□□□□□ -0.74
SHMT2-212ENST00000554467 GLS2Q9UI32 602 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 MOKQ9UQ07 419 aa10.45□□□□□ -0.74
SHMT2-212ENST00000554467 MED13Q9UHV7 2174 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 LIPT2A6NK58 231 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 DHFRP00374 187 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 MT-ND4P03905 459 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 GP1BAP07359 652 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 ALOX5APP20292 161 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 RAB3BP20337 219 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 THBS2P35442 1172 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 EIF1AXP47813 144 aaKnown RBP10.44□□□□□ -0.74
SHMT2-212ENST00000554467 PITPNBP48739 271 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 LUZP2Q86TE4 346 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 RPS19BP1Q86WX3 136 aaKnown RBP10.44□□□□□ -0.74
SHMT2-212ENST00000554467 NAXDQ8IW45 347 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 DNAAF1Q8NEP3 725 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 TCFL5Q9UL49 500 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 IGHV3-15A0A0B4J1V0 119 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 H0YC42 278 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 EIF1AYO14602 144 aaKnown RBP10.44□□□□□ -0.74
SHMT2-212ENST00000554467 ATF1P18846 271 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 PTBP1P26599 531 aaKnown RBP eCLIP10.44□□□□□ -0.74
SHMT2-212ENST00000554467 BIDP55957 195 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 HSF1Q00613 529 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 SPEM2Q0P670 501 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 HSD17B12Q53GQ0 312 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 HES5Q5TA89 166 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 OR7E24Q6IFN5 339 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 PPP1R32Q7Z5V6 425 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 TOMM5Q8N4H5 51 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 COQ8AQ8NI60 647 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 MRPS24Q96EL2 167 aaKnown RBP10.44□□□□□ -0.74
SHMT2-212ENST00000554467 ZNF436Q9C0F3 470 aaPredicted RBP10.44□□□□□ -0.74
SHMT2-212ENST00000554467 ELOVL3Q9HB03 270 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 CHST11Q9NPF2 352 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 SLC22A13Q9Y226 551 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 NPTNQ9Y639 398 aa10.44□□□□□ -0.74
SHMT2-212ENST00000554467 IGLV1-36A0A0B4J1U3 117 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 PDCD5O14737 125 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 FZD7O75084 574 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 PTHLHP12272 177 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SSR4P51571 173 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 DGCR2P98153 550 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 PABPC1L2AQ5JQF8 200 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 HBMQ6B0K9 141 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SFRP4Q6FHJ7 346 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-212ENST00000554467 ALKAL2Q6UX46 152 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 C6orf15Q6UXA7 325 aaPredicted RBP10.43□□□□□ -0.74
SHMT2-212ENST00000554467 C3P1Q6ZMU1 363 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 OR2M2Q96R28 347 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 MED9Q9NWA0 146 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 KLHL13Q9P2N7 655 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SCP2D1Q9UJQ7 156 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 C9orf172C9J069 976 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 TP53I11O14683 189 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SSNA1O43805 119 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 SLC19A2O60779 497 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 ABHD16AO95870 558 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 DNASE1L1P49184 302 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 S100A12P80511 92 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 HYAL4Q2M3T9 481 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 DBX2Q6ZNG2 339 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 NDUFAF7Q7L592 441 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 MFSD8Q8NHS3 518 aa10.43□□□□□ -0.74
SHMT2-212ENST00000554467 CHIAQ9BZP6 476 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms