RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 INTS14Q96SY0 518 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 ARHGDIGQ99819 225 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SLC6A7Q99884 636 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 EIF5A2Q9GZV4 153 aaKnown RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 RNF39Q9H2S5 420 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 ASB8Q9H765 288 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 MSL2Q9HCI7 577 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 TIMM13Q9Y5L4 95 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 A0A0D9SEW6 157 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 A0A1B0GW64 132 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 TMEM238C9JI98 176 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 P2RX6O15547 441 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 NME2P1O60361 137 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 IL33O95760 270 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 THY1P04216 161 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 HSF1Q00613 529 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 ST3GAL3Q11203 375 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 VHLLQ6RSH7 139 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SSX7Q7RTT5 188 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 LSRQ86X29 649 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 TMEM86AQ8N2M4 240 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 C11orf42Q8N5U0 333 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 KREMEN2Q8NCW0 462 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 PLPP5Q8NEB5 264 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 OR4C6Q8NH72 309 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 OR5AK2Q8NH90 309 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 DNASE2BQ8WZ79 361 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 OR5P2Q8WZ92 322 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 KLK6Q92876 244 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 FGF13Q92913 245 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 RELTQ969Z4 430 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 OTUB2Q96DC9 234 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SEH1LQ96EE3 360 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SPATA33Q96N06 139 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 ZNF587Q96SQ5 575 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 ZNF2Q9BSG1 426 aaPredicted RBP8.61□□□□□ -1.03
SIX4-202ENST00000554079 C1QTNF2Q9BXJ5 285 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 OR52D1Q9H346 318 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 CDH20Q9HBT6 801 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 PDE7BQ9NP56 450 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 CMC2Q9NRP2 79 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SLC2A8Q9NY64 477 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 SH3BGRL2Q9UJC5 107 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 URGCP-MRPS24S4R325 110 aa8.61□□□□□ -1.03
SIX4-202ENST00000554079 A0A1W2PQH9 124 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 TSPAN11A1L157 253 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 PEX12O00623 359 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 EIF1AYO14602 144 aaKnown RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 FRS3O43559 492 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 PLRG1O43660 514 aaKnown RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 AGR2O95994 175 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 CST4P01036 141 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 MBPP02686 304 aaPredicted RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 PCCBP05166 539 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 CST2P09228 141 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 MPC1LP0DKB6 136 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 CD46P15529 392 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 NTSP30990 170 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 PSMB10P40306 273 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 BUD31P41223 144 aaPredicted RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 EIF1AXP47813 144 aaKnown RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 GLIPR1P48060 266 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 SLC16A1P53985 500 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 ACTA2P62736 377 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 ACTG2P63267 376 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 IL13RA1P78552 427 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 DLK1P80370 383 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 CXCL9Q07325 125 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 FUT5Q11128 374 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 TNFAIP1Q13829 316 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 MRPL58Q14197 206 aaKnown RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 C4orf17Q53FE4 359 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 HIKESHIQ53FT3 197 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 IER5LQ5T953 404 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 LYPLAL1Q5VWZ2 237 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 CD300LGQ6UXG3 332 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 ZNF836Q6ZNA1 936 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 Q6ZVU0 165 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 MTSS1LQ765P7 747 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 OR9K2Q8NGE7 335 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 TMEM159Q96B96 161 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 ANKRD9Q96BM1 317 aaPredicted RBP8.6□□□□□ -1.03
SIX4-202ENST00000554079 BCL2L10Q9HD36 194 aa8.6□□□□□ -1.03
SIX4-202ENST00000554079 TRBV11-1A0A0K0K1C0 115 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 C13orf42A0A1B0GVH6 325 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 A6NJY4 79 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 H3BQ15 152 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SLC16A5O15375 505 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 CCL25O15444 150 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 SRPX2O60687 465 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 DUS4LO95620 317 aaKnown RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 OPN1LWP04000 364 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 GAPDHP04406 335 aaKnown RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 MMP7P09237 267 aaPredicted RBP8.59□□□□□ -1.03
SIX4-202ENST00000554079 OR5H8P0DN80 308 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 NR2F1P10589 423 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 CD37P11049 281 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TEAD1P28347 426 aa8.59□□□□□ -1.03
SIX4-202ENST00000554079 TAGLN2P37802 199 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms