RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 THY1P04216 161 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 MELTFP08582 738 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 WNT2P09544 360 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 ASAH2BP0C7U1 165 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 THRBP10828 461 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 BGNP21810 368 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 CCNOP22674 350 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 EPHA3P29320 983 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 LIPAP38571 399 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 MDH2P40926 338 aaKnown RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 PROK1P58294 105 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 NCALDP61601 193 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 PPP1CBP62140 327 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 MRPS34P82930 218 aaKnown RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 TNFAIP6P98066 277 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 HSF2Q03933 536 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 NPTX1Q15818 432 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 BEAN1Q3B7T3 259 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 C4orf46Q504U0 113 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 ZMAT1Q5H9K5 638 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 MTX3Q5HYI7 312 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 KPRPQ5T749 579 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 FAM205BPQ63HN1 556 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 LRRN1Q6UXK5 716 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 BRD3OSQ6XYD6 125 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 Q6YL49 198 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 Q6ZPA2 131 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 KIRREL3Q8IZU9 778 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 LRRC18Q8N456 261 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM86BQ8N661 226 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 C10orf53Q8N6V4 93 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 STPG3Q8N7X2 389 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 AKR7LQ8NHP1 331 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 NFKBIDQ8NI38 313 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 C10orf82Q8WW14 230 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 ANP32BQ92688 251 aaKnown RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 ITCHQ96J02 903 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 MAELQ96JY0 434 aaKnown RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 SAMD8Q96LT4 415 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF426Q9BUY5 554 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 POFUT1Q9H488 388 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 WDR55Q9H6Y2 383 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM27Q9HBJ8 222 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 SDR39U1Q9NRG7 319 aaPredicted RBP6.06□□□□□ -1.44
ATXN3-219ENST00000553488 SLC25A37Q9NYZ2 338 aa6.06□□□□□ -1.44
ATXN3-219ENST00000553488 CENPBD1B2RD01 187 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 C5orf58C9J3I9 102 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 H0YL77 283 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 TMEM178BH3BS89 294 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 M0R3H8 397 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 CLIC1O00299 241 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 RNF13O43567 381 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 FMO6PO60774 539 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 SLC22A3O75751 556 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 SLC2A10O95528 541 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 CH25HO95992 272 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 IDO1P14902 403 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 CDAP32320 146 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF84P51523 738 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 CLRN1P58418 232 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 RPL15P61313 204 aaKnown RBP6.05□□□□□ -1.44
ATXN3-219ENST00000553488 CDK6Q00534 326 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 PSG4Q00888 419 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 FMODQ06828 376 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 BST1Q10588 318 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 PSG7Q13046 419 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 HLXQ14774 488 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-219ENST00000553488 TAF9Q16594 264 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 C21orf62-AS1Q17RA5 79 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 C6orf10Q5SRN2 563 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 GCNT6Q5T4J0 391 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 HHATQ5VTY9 493 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 RUSC1-AS1Q66K80 236 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 REEP3Q6NUK4 255 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF613Q6PF04 617 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 SLC2A7Q6PXP3 512 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 MAVSQ7Z434 540 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 KLBQ86Z14 1044 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 C1orf174Q8IYL3 243 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 MUC20Q8N307 709 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-219ENST00000553488 OR10S1Q8NGN2 331 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 LINC01006Q8NI28 216 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ITLN1Q8WWA0 313 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 RAB40AQ8WXH6 277 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ASB10Q8WXI3 467 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 THOC1Q96FV9 657 aaKnown RBP6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF607Q96SK3 696 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 OR2H1Q9GZK4 316 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 WNT5BQ9H1J7 359 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 RAD21L1Q9H4I0 556 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 IKZF5Q9H5V7 419 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 RMND5AQ9H871 391 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 SIAEQ9HAT2 523 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 NOX4Q9NPH5 578 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 NANSQ9NR45 359 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 SELENONQ9NZV5 590 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ZIM2Q9NZV7 527 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.05□□□□□ -1.44
ATXN3-219ENST00000553488 ZNF229Q9UJW7 825 aa6.05□□□□□ -1.44
ATXN3-219ENST00000553488 GMEB1Q9Y692 573 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms