RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 C1QL2Q7Z5L3 287 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 BPIFB2Q8N4F0 458 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 SPICQ8N5J4 248 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 OR2Z1Q8NG97 314 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 PTP4A1Q93096 173 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 RASD2Q96D21 266 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 CMBLQ96DG6 245 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 RSRC1Q96IZ7 334 aaKnown RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 SAMD8Q96LT4 415 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 DCLRE1CQ96SD1 692 aaKnown RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 GPX7Q96SL4 187 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 ASH2LQ9UBL3 628 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 PURGQ9UJV8 347 aaKnown RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 SIGLEC7Q9Y286 467 aa10.8□□□□□ -0.68
LINC00643-202ENST00000553426 COA3Q9Y2R0 106 aaPredicted RBP10.8□□□□□ -0.68
LINC00643-202ENST00000553426 UNC119BA6NIH7 251 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 SOCS2O14508 198 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 PTP4A3O75365 173 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 RGS9O75916 674 aaPredicted RBP10.79□□□□□ -0.68
LINC00643-202ENST00000553426 SCG5P05408 212 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 KITLGP21583 273 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 FPR2P25090 351 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 CRABP1P29762 137 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 SMIM11AP58511 58 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 HILS1P60008 231 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 LCN2P80188 198 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 TMEM255AQ5JRV8 349 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 C8orf82Q6P1X6 216 aaPredicted RBP10.79□□□□□ -0.68
LINC00643-202ENST00000553426 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 SEMA6DQ8NFY4 1073 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 OR1F12Q8NHA8 337 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 GCDHQ92947 438 aaPredicted RBP10.79□□□□□ -0.68
LINC00643-202ENST00000553426 MCUR1Q96AQ8 359 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 RBM4Q9BWF3 364 aaKnown RBP10.79□□□□□ -0.68
LINC00643-202ENST00000553426 TMPRSS13Q9BYE2 586 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 NRIP3Q9NQ35 241 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 TMEM106BQ9NUM4 274 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 DCAF13Q9NV06 445 aaKnown RBP10.79□□□□□ -0.68
LINC00643-202ENST00000553426 ZNF446Q9NWS9 450 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 ADA2Q9NZK5 511 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 VSX1Q9NZR4 365 aaPredicted RBP10.79□□□□□ -0.68
LINC00643-202ENST00000553426 NDUFAF4Q9P032 175 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 ABCD2Q9UBJ2 740 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 IL19Q9UHD0 177 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 EGFL7Q9UHF1 273 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 ATPIF1Q9UII2 106 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 PPP1R3CQ9UQK1 317 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 IER3IP1Q9Y5U9 82 aa10.79□□□□□ -0.68
LINC00643-202ENST00000553426 PPIAL4EA0A075B759 164 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 PPIAL4CA0A0B4J2A2 164 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 OR6C6A6NF89 314 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 PPIAL4DF5H284 164 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 WIPF1O43516 503 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 AVPP01185 164 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 PPIAL4FP0DN26 164 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 RAC2P15153 192 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 ADRA2CP18825 462 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 PRDX6P30041 224 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 IFNGR2P38484 337 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 LIMS1P48059 325 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 SLC27A4Q6P1M0 643 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 SMARCD3Q6STE5 483 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 RBMS3Q6XE24 437 aaKnown RBP10.78□□□□□ -0.68
LINC00643-202ENST00000553426 C1orf229Q6ZS94 237 aaPredicted RBP10.78□□□□□ -0.68
LINC00643-202ENST00000553426 JAZF1Q86VZ6 243 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 ATG16L2Q8NAA4 619 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 OR52J3Q8NH60 311 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 FAM216AQ8WUB2 273 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 HAVCR1Q96D42 359 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 NUAK2Q9H093 628 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 IL20RAQ9UHF4 553 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 STARD10Q9Y365 291 aa10.78□□□□□ -0.68
LINC00643-202ENST00000553426 TRBV4-1A0A0J9YWV2 114 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 IFNL4K9M1U5 179 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 RER1O15258 196 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 TXNDC12O95881 172 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 RENP00797 406 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 IGHV2-70P01814 119 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ZNF26P17031 533 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 NOS3P29474 1203 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 OMPP47874 163 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 BTG1P62324 171 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 KCNMB1Q16558 191 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 TMEM155Q4W5P6 130 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 MUC20Q8N307 709 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ZNF283Q8N7M2 679 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 OR13G1Q8NGZ3 307 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 SLC7A6Q92536 515 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 APOBEC3DQ96AK3 386 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ZNF582Q96NG8 517 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ERMAPQ96PL5 475 aaPredicted RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 OR2V2Q96R30 315 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 ELAC2Q9BQ52 826 aaKnown RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 CDADC1Q9BWV3 514 aa10.77□□□□□ -0.69
LINC00643-202ENST00000553426 NSRP1Q9H0G5 558 aaKnown RBP10.77□□□□□ -0.69
LINC00643-202ENST00000553426 HDHD2Q9H0R4 259 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms