RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CSNK1A1P48729 337 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 RND2P52198 227 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 ZNF121P58317 390 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-208ENST00000553278 TAS2R60P59551 318 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 TIMM10P62072 90 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 TCP10Q12799 353 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 ZSCAN26Q16670 478 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 RALGPS2Q86X27 583 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-208ENST00000553278 CD302Q8IX05 232 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 CBR4Q8N4T8 237 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 MREGQ8N565 214 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 OR52E2Q8NGJ4 325 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 OR6Q1Q8NGQ2 317 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.27□□□□□ -1.73
SCFD1-208ENST00000553278 IL22RA2Q969J5 263 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 MARC2Q969Z3 335 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 RPUSD4Q96CM3 377 aaKnown RBP4.27□□□□□ -1.73
SCFD1-208ENST00000553278 RCN3Q96D15 328 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 FAM122AQ96E09 287 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 B3GALT6Q96L58 329 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 SCGB3A2Q96PL1 93 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 LZTS2Q9BRK4 669 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 AGMATQ9BSE5 352 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 NDEL1Q9GZM8 345 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 CCL28Q9NRJ3 127 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 SLC39A1Q9NY26 324 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 ZNF629Q9UEG4 869 aaPredicted RBP4.27□□□□□ -1.73
SCFD1-208ENST00000553278 MOKQ9UQ07 419 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 NEUROG3Q9Y4Z2 214 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 TNFRSF18Q9Y5U5 241 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 SBNO1A3KN83 1393 aa4.27□□□□□ -1.73
SCFD1-208ENST00000553278 A0A0G2JN53 185 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 NCBP2LA6PVI3 153 aaKnown RBP4.26□□□□□ -1.73
SCFD1-208ENST00000553278 KRTAP16-1A8MUX0 517 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 E2F6O75461 281 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 ZMPSTE24O75844 475 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 OXTP01178 125 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 GIPP09681 153 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-208ENST00000553278 HTR2BP41595 481 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 FGF8P55075 233 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-208ENST00000553278 QPRTQ15274 297 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 C15orf32Q32M92 178 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 PAGE3Q5JUK9 113 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 FHL5Q5TD97 284 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 DUPD1Q68J44 220 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 RNF165Q6ZSG1 346 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 FBXO16Q8IX29 292 aaPredicted RBP4.26□□□□□ -1.73
SCFD1-208ENST00000553278 FAM71AQ8IYT1 594 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 FAM9CQ8IZT9 166 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 CCDC54Q8NEL0 328 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 OR6K2Q8NGY2 324 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 NEIL3Q8TAT5 605 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 TMEM239Q8WW34 195 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 CYTH2Q99418 400 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 NRIP2Q9BQI9 281 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 UTP23Q9BRU9 249 aaKnown RBP4.26□□□□□ -1.73
SCFD1-208ENST00000553278 NRBP2Q9NSY0 501 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 SLC17A7Q9P2U7 560 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 MTRF1LQ9UGC7 380 aaKnown RBP4.26□□□□□ -1.73
SCFD1-208ENST00000553278 POFUT2Q9Y2G5 429 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 CEMIPQ8WUJ3 1361 aa4.26□□□□□ -1.73
SCFD1-208ENST00000553278 A0A1W2PQ72 361 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 MGAT4DA6NG13 374 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 TRPC5OSA6NMA1 111 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 GABRPO00591 440 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 FAM189A1O60320 539 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 SC5DO75845 299 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 RAB3DO95716 219 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 HOXC4P09017 264 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-208ENST00000553278 OR8U9P0C7N5 309 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 SMIM10L1P0DMW3 83 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 OR5H8P0DN80 308 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 IGHV3-43DP0DP04 118 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 USF1P22415 310 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-208ENST00000553278 FABP6P51161 128 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 AP1S2P56377 157 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 RIPPLY3P57055 190 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 VSX2P58304 361 aaPredicted RBP4.25□□□□□ -1.73
SCFD1-208ENST00000553278 TAS2R39P59534 338 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 COTL1Q14019 142 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 THEM4Q5T1C6 240 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 BAIAP2L2Q6UXY1 529 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 TEX43Q6ZNM6 134 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 ZFP41Q8N8Y5 198 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 WDR31Q8NA23 367 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 CHST4Q8NCG5 386 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 OR8U1Q8NH10 309 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 SMIM10Q96HG1 83 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 CPB2Q96IY4 423 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 CLMPQ9H6B4 373 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 Q9UF83 564 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 HYOU1Q9Y4L1 999 aa4.25□□□□□ -1.73
SCFD1-208ENST00000553278 SEC14L6B5MCN3 397 aa4.24□□□□□ -1.73
SCFD1-208ENST00000553278 ANKRD65E5RJM6 399 aa4.24□□□□□ -1.73
SCFD1-208ENST00000553278 TNFSF11O14788 317 aa4.24□□□□□ -1.73
SCFD1-208ENST00000553278 FADS2O95864 444 aaKnown RBP4.24□□□□□ -1.73
SCFD1-208ENST00000553278 P0C879 139 aa4.24□□□□□ -1.73
SCFD1-208ENST00000553278 ATF6P18850 670 aa4.24□□□□□ -1.73
SCFD1-208ENST00000553278 WARSP23381 471 aaKnown RBP4.24□□□□□ -1.73
SCFD1-208ENST00000553278 IL32P24001 234 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms