RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 GJC3Q8NFK1 279 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 OR6K6Q8NGW6 343 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 STMN2Q93045 179 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 MRPL24Q96A35 216 aaKnown RBP10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 PLEKHA8Q96JA3 519 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 COQ7Q99807 217 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 HCAR1Q9BXC0 346 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 BARX1Q9HBU1 254 aaPredicted RBP10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 USE1Q9NZ43 259 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 CYB5R1Q9UHQ9 305 aa10.09□□□□□ -0.79
TRAFD1-209ENST00000552896 FAM183AA6NL82 134 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ZAR1LA6NP61 321 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 PRR23D1E9PI22 279 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 J3QW42 95 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 RER1O15258 196 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ALPLP05186 524 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 FAM157BP0CG42 384 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 PRR23D2P0DMB1 279 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 CLUP10909 449 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNF823P16415 610 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 CCNOP22674 350 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 FMO3P31513 532 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ENTPD1P49961 510 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 UCP2P55851 309 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 PCK2Q16822 640 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 MST1LQ2TV78 715 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 CCDC92Q53HC0 331 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ELFN2Q5R3F8 820 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 LINC01590Q5TEZ4 76 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 SLX4IPQ5VYV7 408 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 TMEM236Q5W0B7 351 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 RGS7BPQ6MZT1 257 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ARL9Q6T311 187 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 CFAP77Q6ZQR2 320 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 RFPL4BQ6ZWI9 263 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNF101Q8IZC7 436 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 PQLC1Q8N2U9 271 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 OR51L1Q8NGJ5 315 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 OR2AJ1Q8NGZ0 328 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 OR1F12Q8NHA8 337 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNRF4Q8WWF5 429 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 IPCEF1Q8WWN9 437 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 DCLRE1CQ96SD1 692 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 MRPL37Q9BZE1 423 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 MED20Q9H944 212 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 MARCH7Q9H992 704 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ELOVL3Q9HB03 270 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 HINT3Q9NQE9 182 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 EIF3KQ9UBQ5 218 aaKnown RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 GDF2Q9UK05 429 aaPredicted RBP10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 PMF1-BGLAPU3KQ54 211 aa10.08□□□□□ -0.8
TRAFD1-209ENST00000552896 ACANP16112 2415 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 TVP23AA6NH52 213 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 EI24O14681 340 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 GLCEO94923 617 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ABHD16AO95870 558 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 IGHV4-39P01824 125 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 LCKP06239 509 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ZNF250P15622 560 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 SLC2A5P22732 501 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 RGS6P49758 472 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ALDH3A2P51648 485 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 KLF3P57682 345 aaPredicted RBP10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ECH1Q13011 328 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 MSMPQ1L6U9 139 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 KRTAP27-1Q3LI81 207 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 TEX30Q5JUR7 227 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 SLC35D3Q5M8T2 416 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 C12orf73Q69YU5 71 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 PLBD1Q6P4A8 553 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 CORO6Q6QEF8 472 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 LYPD4Q6UWN0 246 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 CXXC5Q7LFL8 322 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 TGIF2LYQ8IUE0 185 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 LINC00346Q8IVM7 164 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 OTULINQ96BN8 352 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 C4orf45Q96LM5 186 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 INTS14Q96SY0 518 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ATF6BQ99941 703 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 C9orf16Q9BUW7 83 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 CDADC1Q9BWV3 514 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 OR51B6Q9H340 312 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 WDR76Q9H967 626 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 PNRC2Q9NPJ4 139 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 DDX28Q9NUL7 540 aaKnown RBP10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ORC6Q9Y5N6 252 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 ZANQ9Y493 2812 aa10.07□□□□□ -0.8
TRAFD1-209ENST00000552896 IGLV3-9A0A075B6K5 115 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 TMEM129A0AVI4 362 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 M0R233 179 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 SPARCP09486 303 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 PSKH1P11801 424 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 TUBG1P23258 451 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 EPHA2P29317 976 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 GSTT1P30711 240 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 ERVS71-1P61550 626 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 PPP1CBP62140 327 aa10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 MBNL2Q5VZF2 373 aaKnown RBP10.06□□□□□ -0.8
TRAFD1-209ENST00000552896 CPOQ8IVL8 374 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms