RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 CHIT1Q13231 466 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SMAD4Q13485 552 aaKnown RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TRA2AQ13595 282 aaKnown RBP eCLIP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 GGTLC2Q14390 218 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF234Q14588 700 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CLINT1Q14677 625 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TMEM241Q24JQ0 296 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TMEM69Q5SWH9 247 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 LYPLAL1Q5VWZ2 237 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 GGNBP1Q5YKI7 109 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 WSCD1Q658N2 575 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ACSM2BQ68CK6 577 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF774Q6NX45 483 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PRSS54Q6PEW0 395 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC22A25Q6T423 547 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 GLT6D1Q7Z4J2 308 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SERPINA9Q86WD7 417 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TRAPPC5Q8IUR0 188 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 GABRG1Q8N1C3 465 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 TMEM86AQ8N2M4 240 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 RNF175Q8N4F7 328 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ARL14Q8N4G2 192 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF614Q8N883 585 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ZDHHC22Q8N966 263 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 LMNTD1Q8N9Z9 388 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 INO80EQ8NBZ0 244 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ACBD4Q8NC06 268 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CPEB3Q8NE35 698 aaKnown RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR7G2Q8NG99 324 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR4E2Q8NGC2 313 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR4K1Q8NGD4 311 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR5L2Q8NGL0 311 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OR13C5Q8NGS8 318 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ZNF671Q8TAW3 534 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 NEK7Q8TDX7 302 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 C16orf78Q8WTQ4 265 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SMPDL3AQ92484 453 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 RGP1Q92546 391 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 MRGPRFQ96AM1 343 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CMBLQ96DG6 245 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PELI1Q96FA3 418 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CPNE2Q96FN4 548 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PCED1BQ96HM7 432 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PPP1R16AQ96I34 528 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PACRGQ96M98 296 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 WFIKKN1Q96NZ8 548 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SMIM14Q96QK8 99 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 C20orf144Q9BQM9 153 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PCGF1Q9BSM1 259 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 FNDC11Q9BVV2 318 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 DPH1Q9BZG8 443 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 CIPCQ9C0C6 399 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SIRT3Q9NTG7 399 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 AURKAIP1Q9NWT8 199 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 COMMD9Q9P000 198 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 MYOTQ9UBF9 498 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC23A2Q9UGH3 650 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PITPNC1Q9UKF7 332 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 OSGIN2Q9Y236 505 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 ASF1AQ9Y294 204 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 COA3Q9Y2R0 106 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 PCYT1BQ9Y5K3 369 aaPredicted RBP4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 SLCO1B1Q9Y6L6 691 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 V9GY05 133 aa4.75□□□□□ -1.65
LSM3P2-201ENST00000551246 GREB1Q4ZG55 1949 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 IGLV3-16A0A075B6K0 115 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 TRBV24-1A0A075B6N3 115 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 SMCO3A2RU48 225 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 TLCD2A6NGC4 264 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 MSGN1A6NI15 193 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 ANKRD66B4E2M5 251 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 M0QZ92 97 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 M0R3H8 397 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 LDLRAD4O15165 306 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 INSIG1O15503 277 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 P2RX6O15547 441 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 SEPT4O43236 478 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 LRP3O75074 770 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 DNAJB6O75190 326 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 SLC25A14O95258 325 aaPredicted RBP4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 TOMM40O96008 361 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 THY1P04216 161 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 OR8U9P0C7N5 309 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 TRGC1P0CF51 173 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 MED14OSP0DP75 135 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 PTHLHP12272 177 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 ST6GAL1P15907 406 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 IGFBP6P24592 240 aaPredicted RBP4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 AKT2P31751 481 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 BRS3P32247 399 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 IGFALSP35858 605 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 WNT5AP41221 380 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 GPR4P46093 362 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 RPS10P46783 165 aaKnown RBP4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 OR3A1P47881 315 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 GLIPR1P48060 266 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 TNFSF10P50591 281 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 PTTG1IPP53801 180 aa4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 KLF3P57682 345 aaPredicted RBP4.74□□□□□ -1.65
LSM3P2-201ENST00000551246 SIRPAP78324 504 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms