RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 CRYBG3Q68DQ2 2970 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 DCHS2Q6V1P9 2916 aa11.29□□□□□ -0.6
RAB5C-206ENST00000550406 IQCMA0A1B0GVH7 501 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 ATP6V1G2-DDX39BF2Z307 99 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 J3QRE1 110 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 DOK2O60496 412 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 DBHP09172 617 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 SBK2P0C263 348 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 COX5BP10606 129 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 STOMP27105 288 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 WNT5AP41221 380 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 NUDT6P53370 316 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 NR1H2P55055 460 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 PLP2Q04941 152 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 CDK5R2Q13319 367 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 TMED1Q13445 227 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 EIF2B1Q14232 305 aaKnown RBP11.28□□□□□ -0.6
RAB5C-206ENST00000550406 RAB35Q15286 201 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 SNCBQ16143 134 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 ADAM5Q6NVV9 412 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 ZNF704Q6ZNC4 412 aaPredicted RBP11.28□□□□□ -0.6
RAB5C-206ENST00000550406 SHFQ7M4L6 423 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 RFLNBQ8N5W9 214 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 OR4F15Q8NGB8 312 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 OR51G2Q8NGK0 314 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 OR2AJ1Q8NGZ0 328 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 OTOSQ8NHW6 89 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 YIPF3Q9GZM5 350 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 C1orf198Q9H425 327 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 AMBNQ9NP70 447 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 CLN6Q9NWW5 311 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 PLEK2Q9NYT0 353 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 FBXL3Q9UKT7 428 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 RNF115Q9Y4L5 304 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 HSPE1-MOB4S4R3N1 261 aa11.28□□□□□ -0.6
RAB5C-206ENST00000550406 E7EQL1 145 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 ADRA2AP08913 450 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 DBTP11182 482 aaKnown RBP11.27□□□□□ -0.61
RAB5C-206ENST00000550406 ALOX5APP20292 161 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 ANOS1P23352 680 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 MYF6P23409 242 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 HTR5AP47898 357 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF91Q05481 1191 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 MSMPQ1L6U9 139 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 SPATC1Q76KD6 591 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 THAP5Q7Z6K1 395 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 NAA40Q86UY6 237 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 SLC35F2Q8IXU6 374 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 C8orf59Q8N0T1 100 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-206ENST00000550406 PIAS4Q8N2W9 510 aaPredicted RBP11.27□□□□□ -0.61
RAB5C-206ENST00000550406 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 IL17RDQ8NFM7 739 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 RFKQ969G6 155 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 LGALS12Q96DT0 336 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 SLAMF6Q96DU3 332 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 RNFT2Q96EX2 444 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 Q96MT0 163 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 CNN2Q99439 309 aaKnown RBP11.27□□□□□ -0.61
RAB5C-206ENST00000550406 COQ7Q99807 217 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 MRPS18AQ9NVS2 196 aaKnown RBP11.27□□□□□ -0.61
RAB5C-206ENST00000550406 EXOGQ9Y2C4 368 aaKnown RBP11.27□□□□□ -0.61
RAB5C-206ENST00000550406 PCDHGB5Q9Y5G0 923 aa11.27□□□□□ -0.61
RAB5C-206ENST00000550406 DSCAMO60469 2012 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 ROS1P08922 2347 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 PLCE1Q9P212 2302 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 C5orf49A4QMS7 147 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 TMCC2O75069 709 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 PTHP01270 115 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 CRYAAP02489 173 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 NR4A1P22736 598 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 SSTR2P30874 369 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 APLNRP35414 380 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 SLC15A1P46059 708 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 MTNR1AP48039 350 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 GDI2P50395 445 aaKnown RBP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 NKX6-1P78426 367 aaPredicted RBP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 TBC1D28Q2M2D7 210 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF672Q499Z4 452 aaPredicted RBP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 SSX6Q7RTT6 188 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 OR1J2Q8NGS2 313 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 THEM6Q8WUY1 208 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 RNF133Q8WVZ7 376 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 AKAP1Q92667 903 aaKnown RBP eCLIP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 RADILQ96JH8 1075 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 ATF6BQ99941 703 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 RHNO1Q9BSD3 238 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 ANKRD60Q9BZ19 345 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 HDHD2Q9H0R4 259 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 RASSF4Q9H2L5 321 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 CLEC4MQ9H2X3 399 aaPredicted RBP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 CENPMQ9NSP4 180 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 DDX28Q9NUL7 540 aaKnown RBP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 RAB26Q9ULW5 256 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.26□□□□□ -0.61
RAB5C-206ENST00000550406 FBN2P35556 2912 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 CELSR2Q9HCU4 2923 aa11.26□□□□□ -0.61
RAB5C-206ENST00000550406 C5orf63A6NC05 138 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms