RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ADGRE4PQ86SQ3 457 aa13.54□□□□□ -0.24
CUX1-214ENST00000550008 PDZD9Q8IXQ8 264 aa13.54□□□□□ -0.24
CUX1-214ENST00000550008 ZPLD1Q8TCW7 415 aa13.54□□□□□ -0.24
CUX1-214ENST00000550008 ST8SIA1Q92185 356 aa13.54□□□□□ -0.24
CUX1-214ENST00000550008 TSPAN32Q96QS1 320 aa13.54□□□□□ -0.24
CUX1-214ENST00000550008 EMC3Q9P0I2 261 aa13.54□□□□□ -0.24
CUX1-214ENST00000550008 A0A096LPE4 126 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 A0A1W2PPZ6 126 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 H7C2Y5 167 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 ARPC3O15145 178 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CCL4P13236 92 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 AGTR1P30556 359 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 RAD52P43351 418 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 TEX19Q8NA77 164 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 SPACA9Q96E40 222 aaPredicted RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 ALKBH3Q96Q83 286 aaPredicted RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 CLCC1Q96S66 551 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 ABHD1Q96SE0 405 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 MED18Q9BUE0 208 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 KCNE5Q9UJ90 142 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 ZNF85Q03923 595 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 ZNF141Q15928 474 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 BCL2A1Q16548 175 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 EMC4Q5J8M3 183 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 WDR38Q5JTN6 314 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 GRAMD2AQ8IUY3 354 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 PTPMT1Q8WUK0 201 aaPredicted RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 ROBO4Q8WZ75 1007 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 AICDAQ9GZX7 198 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 KCNK15Q9H427 330 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 SIRT4Q9Y6E7 314 aaPredicted RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 C4orf47A7E2U8 309 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 TNFSF12O43508 249 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 ABHD16AO95870 558 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CD3DP04234 171 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 C11orf40Q8WZ69 217 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CMSS1Q9BQ75 279 aaKnown RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 C1QTNF6Q9BXI9 259 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CYSLTR2Q9NS75 346 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 PIGLQ9Y2B2 252 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 LOXL2Q9Y4K0 774 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 PCDHGA5Q9Y5G8 931 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 EIF1BO60739 113 aaKnown RBP13.53□□□□□ -0.24
CUX1-214ENST00000550008 GABRB1P18505 474 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CAV2P51636 162 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 SLC37A1P57057 533 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CDC20Q12834 499 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 EXT1Q16394 746 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 JAM3Q9BX67 310 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 S1PR5Q9H228 398 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 GPR173Q9NS66 373 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 B3GALT5Q9Y2C3 310 aa13.53□□□□□ -0.24
CUX1-214ENST00000550008 CENPFP49454 3210 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 M0R036 132 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 PLPP2O43688 288 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 EPHA1P21709 976 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 APLNRP35414 380 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 CCL11P51671 97 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 IRF3Q14653 427 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 RFLNBQ8N5W9 214 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 GJC3Q8NFK1 279 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 CPT1CQ8TCG5 803 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 OCIAD1Q9NX40 245 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 LRFN1Q9P244 771 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 LRP12Q9Y561 859 aa13.52□□□□□ -0.24
CUX1-214ENST00000550008 FAM221AA4D161 298 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 ALG1L2C9J202 215 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 SDCBPO00560 298 aaPredicted RBP13.52□□□□□ -0.25
CUX1-214ENST00000550008 BET1O15155 118 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 EPHA8P29322 1005 aaPredicted RBP13.52□□□□□ -0.25
CUX1-214ENST00000550008 DDOSTP39656 456 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 AKR1C2P52895 323 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 MEF2DQ14814 521 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 CDK10Q15131 360 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 C1QTNF12Q5T7M4 302 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 HACD4Q5VWC8 232 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 KMT5CQ86Y97 462 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 MAML2Q8IZL2 1156 aaPredicted RBP13.52□□□□□ -0.25
CUX1-214ENST00000550008 OTOSQ8NHW6 89 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 KCNG3Q8TAE7 436 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 HRASLSQ9HDD0 168 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 ETV7Q9Y603 341 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 TNFSF11O14788 317 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 FAM76BQ5HYJ3 339 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 SGPP2Q8IWX5 399 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 OR52B4Q8NGK2 314 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 NINJ1Q92982 152 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 NECAB3Q96P71 396 aaPredicted RBP13.52□□□□□ -0.25
CUX1-214ENST00000550008 CDX2Q99626 313 aaPredicted RBP13.52□□□□□ -0.25
CUX1-214ENST00000550008 PRSS27Q9BQR3 290 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 GON7Q9BXV9 100 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 RNF32Q9H0A6 362 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 SAV1Q9H4B6 383 aaPredicted RBP13.52□□□□□ -0.25
CUX1-214ENST00000550008 ASF1BQ9NVP2 202 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 TRPM7Q96QT4 1865 aa13.52□□□□□ -0.25
CUX1-214ENST00000550008 RAP2BP61225 183 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 FGL1Q08830 312 aa13.51□□□□□ -0.25
CUX1-214ENST00000550008 PPA1Q15181 289 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms