RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 OVOL3O00110 214 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 EI24O14681 340 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 SYNGR3O43761 229 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 TLX2O43763 284 aaPredicted RBP12.9□□□□□ -0.34
GPN3-206ENST00000549963 ABHD16AO95870 558 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 ALPLP05186 524 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 CLUP10909 449 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 GCH1P30793 250 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 PTH2RP49190 550 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 ATP5J2P56134 94 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 CDC42P60953 191 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 HIST1H3AP68431 136 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 TAF13Q15543 124 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 ZNF718Q3SXZ3 478 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 CCDC92Q53HC0 331 aaPredicted RBP12.9□□□□□ -0.34
GPN3-206ENST00000549963 TEX30Q5JUR7 227 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 HIST2H3PS2Q5TEC6 136 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 LCN1P1Q5VSP4 162 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 SLX4IPQ5VYV7 408 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 OTPQ5XKR4 325 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 SLC18B1Q6NT16 456 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 TMEM154Q6P9G4 183 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 CORO6Q6QEF8 472 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 HIST2H3AQ71DI3 136 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 SHFQ7M4L6 423 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 LINC00346Q8IVM7 164 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 CBR4Q8N4T8 237 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 ZNF511Q8NB15 262 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 OR1J1Q8NGS3 322 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 PERPQ96FX8 193 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 INTS14Q96SY0 518 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 COQ7Q99807 217 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 CACNG6Q9BXT2 260 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 GABARAPL3Q9BY60 117 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 OR51B6Q9H340 312 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 BARX1Q9HBU1 254 aaPredicted RBP12.9□□□□□ -0.34
GPN3-206ENST00000549963 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
GPN3-206ENST00000549963 MRPL22Q9NWU5 206 aaKnown RBP12.9□□□□□ -0.34
GPN3-206ENST00000549963 DUSP13Q9UII6 198 aa12.9□□□□□ -0.34
GPN3-206ENST00000549963 GDF2Q9UK05 429 aaPredicted RBP12.9□□□□□ -0.34
GPN3-206ENST00000549963 SPARCP09486 303 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 GGT2P36268 569 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 CDKN1AP38936 164 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 RGS6P49758 472 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 SWI5Q1ZZU3 235 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 PRSS57Q6UWY2 283 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 ERI1Q8IV48 349 aaKnown RBP12.89□□□□□ -0.35
GPN3-206ENST00000549963 PAQR4Q8N4S7 273 aaPredicted RBP12.89□□□□□ -0.35
GPN3-206ENST00000549963 TCEANCQ8N8B7 351 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 OR5L1Q8NGL2 311 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 SYNPRQ8TBG9 265 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 IGFBPL1Q8WX77 278 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 SPTSSAQ969W0 71 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 MRPL24Q96A35 216 aaKnown RBP12.89□□□□□ -0.35
GPN3-206ENST00000549963 ATF6BQ99941 703 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 RAB1BQ9H0U4 201 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 CXXC4Q9H2H0 198 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 WDR76Q9H967 626 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 HINT3Q9NQE9 182 aaKnown RBP12.89□□□□□ -0.35
GPN3-206ENST00000549963 C8orf4Q9NR00 106 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 TBCCD1Q9NVR7 557 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 COMMD3-BMI1R4GMX3 469 aa12.89□□□□□ -0.35
GPN3-206ENST00000549963 MAST4O15021 2626 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 J3QW42 95 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 GPRIN2O60269 458 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 MT-ND5P03915 603 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 ANPEPP15144 967 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 SLC15A1P46059 708 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 NUDT6P53370 316 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 TPTEP56180 551 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 KLF3P57682 345 aaPredicted RBP12.88□□□□□ -0.35
GPN3-206ENST00000549963 APOFQ13790 326 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 C12orf73Q69YU5 71 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 C11orf71Q6IPW1 123 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 DCXRQ7Z4W1 244 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 OR6N2Q8NGY6 317 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 ABHD4Q8TB40 342 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 TMEM163Q8TC26 289 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 ZNRF4Q8WWF5 429 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 TRUB1Q8WWH5 349 aaKnown RBP12.88□□□□□ -0.35
GPN3-206ENST00000549963 TEAD3Q99594 435 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 VRK1Q99986 396 aaPredicted RBP12.88□□□□□ -0.35
GPN3-206ENST00000549963 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 MS4A5Q9H3V2 200 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 DCLRE1BQ9H816 532 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 IMPAD1Q9NX62 359 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 SLCO1C1Q9NYB5 712 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 CCDC168Q8NDH2 2452 aa12.88□□□□□ -0.35
GPN3-206ENST00000549963 A0A1W2PPW3 197 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 H3BSA7 217 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 H7C417 338 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 PRKYO43930 277 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 ICMTO60725 284 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 ZNF250P15622 560 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 EPHA2P29317 976 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 PPP1CBP62140 327 aa12.87□□□□□ -0.35
GPN3-206ENST00000549963 DBPQ10586 325 aaPredicted RBP12.87□□□□□ -0.35
GPN3-206ENST00000549963 EIF2B1Q14232 305 aaKnown RBP12.87□□□□□ -0.35
GPN3-206ENST00000549963 RCN1Q15293 331 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 803.9 ms