RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ZNF101Q8IZC7 436 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 PARP8Q8N3A8 854 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 OR4F5Q8NH21 305 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 IPCEF1Q8WWN9 437 aaPredicted RBP11.38□□□□□ -0.59
CDX2-202ENST00000548877 DACT3Q96B18 629 aaPredicted RBP11.38□□□□□ -0.59
CDX2-202ENST00000548877 POM121L2Q96KW2 1035 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 ZNF570Q96NI8 536 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 EVA1AQ9H8M9 152 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 TAS2R5Q9NYW4 299 aa11.38□□□□□ -0.59
CDX2-202ENST00000548877 CENPBD1B2RD01 187 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 TPST1O60507 370 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 TPST2O60704 377 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 NGFP01138 241 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 QDPRP09417 244 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 SBK2P0C263 348 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 OMGP23515 440 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 APLNRP35414 380 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 MPV17P39210 176 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 WNT5AP41221 380 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 AQP4P55087 323 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 CDH12P55289 794 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 SEC61A1P61619 476 aaKnown RBP11.37□□□□□ -0.59
CDX2-202ENST00000548877 LRRC23Q53EV4 343 aaPredicted RBP11.37□□□□□ -0.59
CDX2-202ENST00000548877 SPRNQ5BIV9 151 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 ZMAT1Q5H9K5 638 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 THEM4Q5T1C6 240 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 OLFML2AQ68BL7 652 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 CBLL1Q75N03 491 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 CCDC80Q76M96 950 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 AMIGO2Q86SJ2 522 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 PATL1Q86TB9 770 aaKnown RBP11.37□□□□□ -0.59
CDX2-202ENST00000548877 PTOV1Q86YD1 416 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 KIR3DL3Q8N743 410 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 OR52E2Q8NGJ4 325 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 KLF14Q8TD94 323 aaPredicted RBP11.37□□□□□ -0.59
CDX2-202ENST00000548877 MAL2Q969L2 176 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 MRPL13Q9BYD1 178 aaKnown RBP11.37□□□□□ -0.59
CDX2-202ENST00000548877 SEMA6AQ9H2E6 1030 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 TMEM27Q9HBJ8 222 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 BATF3Q9NR55 127 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 TMEM106BQ9NUM4 274 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 DCAF16Q9NXF7 216 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 SELENONQ9NZV5 590 aa11.37□□□□□ -0.59
CDX2-202ENST00000548877 CLPSL1A2RUU4 121 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 FAM181BA6NEQ2 426 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 SRRM5B3KS81 715 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 C5orf58C9J3I9 102 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 C11orf98E9PRG8 122 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 GNGT2O14610 69 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 DENRO43583 198 aaKnown RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 SERPINI2O75830 405 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 ZNF682O95780 498 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RPSAP08865 295 aaKnown RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 ZNF26P17031 533 aaPredicted RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 STOMP27105 288 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 ARHGDIAP52565 204 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RAG2P55895 527 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 BPIFB3P59826 476 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RPL15P61313 204 aaKnown RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 CDK6Q00534 326 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RELBQ01201 579 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 CDK5R2Q13319 367 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 SCARB2Q14108 478 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 PABPC1L2AQ5JQF8 200 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 ASPHD2Q6ICH7 369 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 LRRN1Q6UXK5 716 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 ZDHHC13Q8IUH4 622 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 TMEM86BQ8N661 226 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 SLC25A40Q8TBP6 338 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RASSF5Q8WWW0 418 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 GEMIN6Q8WXD5 167 aaKnown RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 MCHR2Q969V1 340 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 SAMD8Q96LT4 415 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RDH12Q96NR8 316 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 SIGLEC11Q96RL6 698 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 CIB1Q99828 191 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 RBM4BQ9BQ04 359 aaKnown RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 SPATA5L1Q9BVQ7 753 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 OR2J1Q9GZK6 312 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 IL1RAPQ9NPH3 570 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 C1RLQ9NZP8 487 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 EIF3KQ9UBQ5 218 aaKnown RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 OR5V1Q9UGF6 321 aa11.36□□□□□ -0.59
CDX2-202ENST00000548877 SOX21Q9Y651 276 aaPredicted RBP11.36□□□□□ -0.59
CDX2-202ENST00000548877 LOC100509620A0A075B734 347 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 MAGEA13PA6NCF6 341 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 HOXA3O43365 443 aaPredicted RBP11.35□□□□□ -0.59
CDX2-202ENST00000548877 FMO6PO60774 539 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 OR6A2O95222 327 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 GPANK1O95872 356 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 CST1P01037 141 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 IGHG1P01857 330 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 WNT2P09544 360 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 MAGEA2P43356 314 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 BTG1P62324 171 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 MRPS34P82930 218 aaKnown RBP11.35□□□□□ -0.59
CDX2-202ENST00000548877 GK3PQ14409 553 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 ZMYND11Q15326 602 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 ZNF74Q16587 644 aa11.35□□□□□ -0.59
CDX2-202ENST00000548877 ESCO2Q56NI9 601 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms