RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 BCL6BQ8N143 479 aaPredicted RBP17.15■□□□□ 0.34
SSH1-207ENST00000547862 ZNF283Q8N7M2 679 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 FAM46AQ96IP4 442 aaKnown RBP17.15■□□□□ 0.34
SSH1-207ENST00000547862 HSH2DQ96JZ2 352 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 MRI1Q9BV20 369 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 MRGBPQ9NV56 204 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 TBCCD1Q9NVR7 557 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 ASH2LQ9UBL3 628 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 NUP50Q9UKX7 468 aa17.15■□□□□ 0.34
SSH1-207ENST00000547862 HTR3EA5X5Y0 456 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 CXCR6O00574 342 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 IMPA2O14732 288 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 CD14P08571 375 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 DBHP09172 617 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 COX5BP10606 129 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 ZNF26P17031 533 aaPredicted RBP17.14■□□□□ 0.33
SSH1-207ENST00000547862 CENPAP49450 140 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 LIPEQ05469 1076 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 AQP6Q13520 282 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 HLXQ14774 488 aaPredicted RBP17.14■□□□□ 0.33
SSH1-207ENST00000547862 ESCO2Q56NI9 601 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 MBOAT2Q6ZWT7 520 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 RRM2BQ7LG56 351 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 ATG16L2Q8NAA4 619 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 SAMD8Q96LT4 415 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 NDEL1Q9GZM8 345 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 SYT4Q9H2B2 425 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 ARGLU1Q9NWB6 273 aaPredicted RBP17.14■□□□□ 0.33
SSH1-207ENST00000547862 OR5V1Q9UGF6 321 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 IL20RAQ9UHF4 553 aa17.14■□□□□ 0.33
SSH1-207ENST00000547862 PRSS37A4D1T9 235 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 SOCS2O14508 198 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 SLC16A7O60669 478 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 SERPINA1P01009 418 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 ZNF12P17014 697 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 KITLGP21583 273 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 MMP16P51512 607 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 GUCY1A3Q02108 690 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 ANKDD1AQ495B1 522 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 ZBED5Q49AG3 693 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 TMEM155Q4W5P6 130 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 FGD3Q5JSP0 725 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 KLF17Q5JT82 389 aaPredicted RBP17.13■□□□□ 0.33
SSH1-207ENST00000547862 ZNF420Q8TAQ5 688 aaPredicted RBP17.13■□□□□ 0.33
SSH1-207ENST00000547862 FAM162AQ96A26 154 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 SIGLEC11Q96RL6 698 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 VIPAS39Q9H9C1 493 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 COA3Q9Y2R0 106 aaPredicted RBP17.13■□□□□ 0.33
SSH1-207ENST00000547862 INSIG2Q9Y5U4 225 aa17.13■□□□□ 0.33
SSH1-207ENST00000547862 PPIAL4EA0A075B759 164 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 PPIAL4CA0A0B4J2A2 164 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 CEACAM18A8MTB9 384 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 PPIAL4DF5H284 164 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 SURF4O15260 269 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 GPANK1O95872 356 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 PPIAL4FP0DN26 164 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 RPS2P15880 293 aaKnown RBP17.12■□□□□ 0.33
SSH1-207ENST00000547862 SLC7A2P52569 658 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 BAMBIQ13145 260 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 OR2T2Q6IF00 324 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 FAM122BQ7Z309 247 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 ARPINQ7Z6K5 226 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 JAZF1Q86VZ6 243 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 BHLHE23Q8NDY6 225 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 IL19Q9UHD0 177 aa17.12■□□□□ 0.33
SSH1-207ENST00000547862 DOCK11Q5JSL3 2073 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 F5H0A9 414 aaPredicted RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 RER1O15258 196 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 KHDRBS3O75525 346 aaKnown RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 SASH3O75995 380 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 CYB5R3P00387 301 aaPredicted RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 HKR1P10072 659 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 NCK1P16333 377 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 MDH2P40926 338 aaKnown RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 SLC6A9P48067 706 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 PRSS12P56730 875 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 MEP1BQ16820 701 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 CCDC92Q53HC0 331 aaPredicted RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 DOK3Q7L591 496 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 CYP4Z1Q86W10 505 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 LRRC28Q86X40 367 aaPredicted RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 SLC15A3Q8IY34 581 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 RNF113BQ8IZP6 322 aaKnown RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 OR1F12Q8NHA8 337 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 TAF15Q92804 592 aaKnown RBP eCLIP17.11■□□□□ 0.33
SSH1-207ENST00000547862 ZNF48Q96MX3 618 aaPredicted RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 MS4A7Q9GZW8 240 aaPredicted RBP17.11■□□□□ 0.33
SSH1-207ENST00000547862 WDR76Q9H967 626 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 TMEM5Q9Y2B1 443 aa17.11■□□□□ 0.33
SSH1-207ENST00000547862 A8MXK9 166 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 TMEM178BH3BS89 294 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 NME4O00746 187 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 NDUFB2O95178 105 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 SDHAP31040 664 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 FOXL1Q12952 345 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 TMPRSS11FQ6ZWK6 438 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 CBLL1Q75N03 491 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 GLB1L2Q8IW92 636 aa17.1■□□□□ 0.33
SSH1-207ENST00000547862 MUC20Q8N307 709 aaPredicted RBP17.1■□□□□ 0.33
SSH1-207ENST00000547862 HAVCR1Q96D42 359 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms