RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 NAAAQ02083 359 aa14.11□□□□□ -0.15
LIMS2-217ENST00000545738 ADAM5Q6NVV9 412 aa14.11□□□□□ -0.15
LIMS2-217ENST00000545738 LILRB1Q8NHL6 650 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-217ENST00000545738 OTOSQ8NHW6 89 aa14.11□□□□□ -0.15
LIMS2-217ENST00000545738 PLEK2Q9NYT0 353 aa14.11□□□□□ -0.15
LIMS2-217ENST00000545738 H2AFY2Q9P0M6 372 aaPredicted RBP14.11□□□□□ -0.15
LIMS2-217ENST00000545738 WARS2Q9UGM6 360 aaKnown RBP14.11□□□□□ -0.15
LIMS2-217ENST00000545738 IGHV2OR16-5A0A0B4J2B6 119 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 ATP6V1G2-DDX39BF2Z307 99 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MAGEB4O15481 346 aaPredicted RBP14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MPZL2O60487 215 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 ZNF35P13682 527 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MYF6P23409 242 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MTNR1AP48039 350 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 BLVRAP53004 296 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SCRN3Q0VDG4 424 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MEDAGQ5VYS4 303 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SPATC1Q76KD6 591 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SLC16A9Q7RTY1 509 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 THAP5Q7Z6K1 395 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SETD9Q8NE22 299 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 KBTBD8Q8NFY9 601 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 LGALS12Q96DT0 336 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 RNFT2Q96EX2 444 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 POM121L2Q96KW2 1035 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 CNN2Q99439 309 aaKnown RBP14.1□□□□□ -0.15
LIMS2-217ENST00000545738 TMEM204Q9BSN7 226 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 ABHD6Q9BV23 337 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 CDADC1Q9BWV3 514 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MYRFQ9Y2G1 1151 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SPG11Q96JI7 2443 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SHISA9B4DS77 424 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 XPNPEP2O43895 674 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 ALOX5APP20292 161 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 STOMP27105 288 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SLC15A1P46059 708 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 PCBD1P61457 104 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 MVKQ03426 396 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 EIF2B1Q14232 305 aaKnown RBP14.1□□□□□ -0.15
LIMS2-217ENST00000545738 BEX5Q5H9J7 111 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 LCN1P1Q5VSP4 162 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 TMEM53Q6P2H8 277 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SLC30A7Q8NEW0 376 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 GJC3Q8NFK1 279 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 SGCDQ92629 289 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 TBX5Q99593 518 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 KCNN2Q9H2S1 579 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 CLN6Q9NWW5 311 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 UBAP1Q9NZ09 502 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 HSPE1-MOB4S4R3N1 261 aa14.1□□□□□ -0.15
LIMS2-217ENST00000545738 RAI1Q7Z5J4 1906 aaPredicted RBP14.09□□□□□ -0.15
LIMS2-217ENST00000545738 PSMD9O00233 223 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 CASKO14936 926 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 CTAG2O75638 210 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 WNT5AP41221 380 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 HTR5AP47898 357 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 RAB35Q15286 201 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 KRTAP27-1Q3LI81 207 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 C3orf36Q3SXR2 165 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 ELFN2Q5R3F8 820 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 TMEM108Q6UXF1 575 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 DPPA2Q7Z7J5 298 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 NAA40Q86UY6 237 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 ZNF101Q8IZC7 436 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 PIAS4Q8N2W9 510 aaPredicted RBP14.09□□□□□ -0.15
LIMS2-217ENST00000545738 RFKQ969G6 155 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 SLAMF6Q96DU3 332 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 CNBD2Q96M20 576 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 FAM210AQ96ND0 272 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 ZNF649Q9BS31 505 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 RAB26Q9ULW5 256 aa14.09□□□□□ -0.15
LIMS2-217ENST00000545738 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.09□□□□□ -0.15
LIMS2-217ENST00000545738 C5orf63A6NC05 138 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 PTAFRP25105 342 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 HSPA13P48723 471 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 KRTAP10-9P60411 292 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 MSMPQ1L6U9 139 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 C11orf91Q3C1V1 193 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 C1QTNF12Q5T7M4 302 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 SLC35F2Q8IXU6 374 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 OR2AJ1Q8NGZ0 328 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 OR1F12Q8NHA8 337 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 RNF133Q8WVZ7 376 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 MARVELD3Q96A59 401 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 C1orf198Q9H425 327 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 DDX28Q9NUL7 540 aaKnown RBP14.08□□□□□ -0.16
LIMS2-217ENST00000545738 FBXL3Q9UKT7 428 aa14.08□□□□□ -0.16
LIMS2-217ENST00000545738 SETXQ7Z333 2677 aaKnown RBP14.08□□□□□ -0.16
LIMS2-217ENST00000545738 A0A1W2PQL4 384 aaPredicted RBP14.07□□□□□ -0.16
LIMS2-217ENST00000545738 C5orf49A4QMS7 147 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 LYNP07948 512 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 CCNOP22674 350 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 CXCR4P61073 352 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 CACNA1DQ01668 2161 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 ZNF85Q03923 595 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 SSX8Q7RTT4 187 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 THEM6Q8WUY1 208 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 ATF6BQ99941 703 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 WACQ9BTA9 647 aa14.07□□□□□ -0.16
LIMS2-217ENST00000545738 YIPF3Q9GZM5 350 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms